Co-expression analysis

Gene ID Contig13278_at
Gene name
Homology with ArabidopsisSimilar to At5g07920: DGK1 (DIACYLGLYCEROL KINASE1) (HF=8e-6)
Module size 10 genes
NF 0.70
%ile 91.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6380.30.89Contig13278_atContig13278--8e-6At5g07920DGK1 (DIACYLGLYCEROL KINASE1)O.I.H.G.S.X.
0.8694.80.90Contig10000_s_atContig10000--8e+0At5g05113unknown proteinO.I.H.G.S.X.
0.8494.30.92Contig10001_atContig10001--9e-6At3g01410RNase H domain-containing proteinO.I.H.G.S.X.
0.7489.10.91Contig19674_atContig19674--9e-2At3g25600calcium ion bindingO.I.H.G.S.X.
0.7489.10.93Contig10380_atContig10380--4e-1At1g17880nascent polypeptide-associated complex (NAC) domain-containing protein / BTF3b-like transcription factor, putativeO.I.H.G.S.X.
0.7287.40.89Contig2532_atContig2532--5e-8At5g54160ATOMT1 (O-METHYLTRANSFERASE 1)O.I.H.G.S.X.
0.6784.70.91Contig20672_x_atContig20672--5e+0At5g54430universal stress protein (USP) family proteinO.I.H.G.S.X.
0.5975.80.92Contig10382_s_atContig10382--6e-38At5g45190cyclin family proteinO.I.H.G.S.X.
0.5774.90.94Contig10383_atContig10383--6e-4At2g22540SVP (SHORT VEGETATIVE PHASE)O.I.H.G.S.X.
0.4053.10.91Contig10417_atContig10417--2e-16At4g21860MSRB2 (methionine sulfoxide reductase B 2)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.699.0GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
7.298.5GSM238411Pericarp 8DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.695.3GSM261066Xantha s-46 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.494.8GSM261065Xantha s-46 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.494.8GSM261064Xantha s-46 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.093.8GSM261078Albina e-16 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.093.8GSM238432Embryo 0 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.993.4GSM16082619% SWC rep3GSE6990Barley drought stressLink to GEO
2.993.4GSM261027ABA-Late-rep1GSE10328ABA experimentLink to GEO
2.893.1GSM261028ABA-Late-rep2GSE10328ABA experimentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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