Co-expression analysis

Gene ID Contig13262_at
Gene name
Homology with ArabidopsisSimilar to At1g67930: Golgi transport complex protein-related (HF=1e-5)
Module size 6 genes
NF 0.18
%ile 21.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.3037.00.77Contig13262_atContig13262--1e-5At1g67930Golgi transport complex protein-relatedO.I.H.G.S.X.
0.4458.90.81Contig13370_s_atContig13370--1e+0At5g61650CYCP4O.I.H.G.S.X.
0.3240.30.80Contig6507_atContig6507--4e-4At5g27740EMB2775 (EMBRYO DEFECTIVE 2775)O.I.H.G.S.X.
0.2122.60.79Contig3113_atContig3113--9e+0Atcg01310-O.I.H.G.S.X.
0.1716.90.79Contig3579_x_atContig3579--4e-1At1g15950CCR1 (CINNAMOYL COA REDUCTASE 1)O.I.H.G.S.X.
0.075.80.77Contig2857_atContig2857--4e-3At1g66680AR401O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.099.5GSM311256hsp5_without_aphids_1GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines Link to GEO
12.899.4GSM311257hsp5_without_aphids_2GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines Link to GEO
11.699.3GSM311255hsp5_with_aphids_3GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines Link to GEO
10.099.1GSM311253hsp5_with_aphids_1GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines Link to GEO
7.198.4GSM311254hsp5_with_aphids_2GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines Link to GEO
6.898.3GSM311258hsp5_without_aphids_3GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines Link to GEO
6.298.0GSM238431Embryo 25DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
5.497.5GSM282038Malting_kilned_Morex_rep1GSE11200Expression data from malting barley seedsLink to GEO
4.997.1GSM282040Malting_kilned_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
4.696.8GSM238430Embryo 25DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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