Co-expression analysis

Gene ID Contig13235_at
Gene name
Homology with ArabidopsisSimilar to At1g80930: MIF4G domain-containing protein / MA3 domain-containing protein (HF=8e-25)
Module size 7 genes
NF 0.44
%ile 61.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5369.70.89Contig13235_atContig13235--8e-25At1g80930MIF4G domain-containing protein / MA3 domain-containing proteinO.I.H.G.S.X.
0.4458.90.90Contig15139_atContig15139--9e-2At1g02180ferredoxin-relatedO.I.H.G.S.X.
0.4458.90.92HVSMEf0001F16r2_s_atHVSMEf0001F16r2--2e+0At1g64490unknown proteinO.I.H.G.S.X.
0.4458.90.93Contig25411_atContig25411--2e+0At2g29540ATRPC14 (RNA POLYMERASE 14 KDA SUBUNIT)O.I.H.G.S.X.
0.4255.20.91Contig14670_atContig14670--5e-1At5g44210ERF9 (ERF DOMAIN PROTEIN 9)O.I.H.G.S.X.
0.4053.10.91Contig26151_atContig26151--1e+0At1g49990-O.I.H.G.S.X.
0.3240.30.91Contig5427_atContig5427--7e-14At2g20900diacylglycerol kinase, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.998.7GSM238435Embryo 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
7.798.6GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
6.798.3GSM431547pathogen isolates: Mock - rep2GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
5.797.7GSM261074Albina e-16 Control rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
5.697.7GSM261070Albina f-17 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
5.597.6GSM431550pathogen isolates: Polymyxa graminis - rep2GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
5.497.5GSM261064Xantha s-46 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
5.097.2GSM238438Embryo 72 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.897.0GSM261076Albina e-16 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
4.796.9GSM238425Endosperm 48 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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