Co-expression analysis

Gene ID Contig13065_at
Gene name
Homology with ArabidopsisSimilar to At1g02335: GL22 (GERMIN-LIKE PROTEIN SUBFAMILY 2 MEMBER 2 PRECURSOR.) (HF=1e-4)
Module size 8 genes
NF 0.57
%ile 79.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6178.70.87Contig13065_atContig13065--1e-4At1g02335GL22 (GERMIN-LIKE PROTEIN SUBFAMILY 2 MEMBER 2 PRECURSOR.)O.I.H.G.S.X.
0.8092.50.87Contig2592_atContig2592--1e-17At5g10860CBS domain-containing proteinO.I.H.G.S.X.
0.7187.10.88Contig16209_atContig16209--2e+0At5g55570unknown proteinO.I.H.G.S.X.
0.6380.30.88EBpi01_SQ002_O17_atEBpi01_SQ002_O17--8e-1At1g07880ATMPK13O.I.H.G.S.X.
0.6178.70.90Contig1474_atContig1474--1e-41At1g0969060S ribosomal protein L21 (RPL21C)O.I.H.G.S.X.
0.5268.30.87EBem10_SQ002_A16_atEBem10_SQ002_A16--5e+0At5g23260TT16 (TRANSPARENT TESTA16)O.I.H.G.S.X.
0.5066.90.88Contig2052_s_atContig2052--3e+0At2g38880NF-YB1 (NUCLEAR FACTOR Y, SUBUNIT B1)O.I.H.G.S.X.
0.3342.60.87HVSMEi0012N18r2_atHVSMEi0012N18r2--1e+1At5g18310unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.797.7GSM282036Malting_steeped_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
3.895.7GSM161221cold treatment rep3GSE6993Barley low temperature stressLink to GEO
3.695.3GSM261032Dicktoo control-rep3GSE10329Low temperature stress in cv. DicktooLink to GEO
3.394.6GSM16082319% SWC rep1GSE6990Barley drought stressLink to GEO
3.093.8GSM282037Malting_day1_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
2.993.4GSM261030Dicktoo-control-rep1GSE10329Low temperature stress in cv. DicktooLink to GEO
2.792.7GSM261040Dicktoo-deacclimation-rep2GSE10329Low temperature stress in cv. DicktooLink to GEO
2.792.7GSM1611487% SWC rep3GSE6990Barley drought stressLink to GEO
2.692.3GSM261022ABA-Control-rep2GSE10328ABA experimentLink to GEO
2.692.3GSM398263HS41-1_0d_rep3GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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