Co-expression analysis

Gene ID	Contig12958_at
Gene name
Homology with Arabidopsis	Similar to At5g50030: invertase/pectin methylesterase inhibitor family protein (HF=8e+0)
Module size	6 genes
NF	0.11
%ile	14.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	84.7	0.87	Contig12958_at	Contig12958	-	-	8e+0	At5g50030	invertase/pectin methylesterase inhibitor family protein	O.I.	H.G.	S.X.	Please select
0.60	77.3	0.83	Contig28_s_at	Contig28	-	-	2e-12	At1g08880	H2AXA	O.I.	H.G.	S.X.	Please select
0.40	53.1	0.84	Contig10331_at	Contig10331	-	-	1e-9	At2g25800	-	O.I.	H.G.	S.X.	Please select
0.36	47.1	0.90	Contig10740_at	Contig10740	-	-	4e-5	At1g56430	NAS4 (NICOTIANAMINE SYNTHASE 4)	O.I.	H.G.	S.X.	Please select
0.04	3.4	0.87	Contig803_at	Contig803	-	-	9e-79	At1g50010	TUA2	O.I.	H.G.	S.X.	Please select
0.03	2.6	0.86	Contig13739_at	Contig13739	-	-	9e-2	At1g19397	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.3	97.4	GSM363465	5 mM B(OH)3 treatment (5B) - rep3	GSE14521	Late response to boron toxicity in barley leaves
5.2	97.4	GSM363461	Control (C) - rep2	GSE14521	Late response to boron toxicity in barley leaves
5.1	97.3	GSM363467	10 mM B(OH)3 treatment (10B) - rep2	GSE14521	Late response to boron toxicity in barley leaves
4.9	97.1	GSM363463	5 mM B(OH)3 treatment (5B) - rep1	GSE14521	Late response to boron toxicity in barley leaves
4.8	97.0	GSM363464	5 mM B(OH)3 treatment (5B) - rep2	GSE14521	Late response to boron toxicity in barley leaves
4.5	96.7	GSM261057	Xantha b-12 Cotrol rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.5	96.7	GSM261058	Xantha b-12 Cotrol rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.3	96.4	GSM213441	Barley seeds control in Hoagland solution for 12hr	GSE8618	P. aeruginosa virulent factor to barley
4.3	96.4	GSM261076	Albina e-16 Control rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.5	95.1	GSM261074	Albina e-16 Control rep1	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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