Co-expression analysis

Gene ID Contig1237_s_at
Gene name aquaporin
Homology with ArabidopsisSimilar to At1g01620: PIP1C (PLASMA MEMBRANE INTRINSIC PROTEIN 1C) (HF=1e-30)
Module size 31 genes
NF 0.19
%ile 22.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9498.90.85Contig1237_s_atContig1237aquaporin-1e-30At1g01620PIP1C (PLASMA MEMBRANE INTRINSIC PROTEIN 1C)O.I.H.G.S.X.
0.3138.60.92Contig11029_atContig11029--2e-10At2g42830SHP2 (SHATTERPROOF 2)O.I.H.G.S.X.
0.3037.00.91Contig3050_atContig3050--2e-3At2g47710universal stress protein (USP) family proteinO.I.H.G.S.X.
0.2835.50.90Contig6730_atContig6730--1e+0At3g10815zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.2835.50.90Contig10912_atContig10912--2e-1At4g28200-O.I.H.G.S.X.
0.2630.40.91Contig12451_atContig12451--1e+0At1g76560CP12-3O.I.H.G.S.X.
0.2630.40.93Contig9944_s_atContig9944--4e+0At2g36890RAX2 (REGULATOR OF AXILLARY MERISTEMS 2)O.I.H.G.S.X.
0.2528.90.92Contig8187_atContig8187--1e-10At5g65720NFS1O.I.H.G.S.X.
0.2427.20.91Contig12545_atContig12545--1e-3At3g27160GHS1 (GLUCOSE HYPERSENSITIVE 1)O.I.H.G.S.X.
0.2326.10.90Contig13062_atContig13062--5e+0At3g61920unknown proteinO.I.H.G.S.X.
0.2122.60.91HM08O22r_s_atHM08O22r--2e+0At2g20560DNAJ heat shock family proteinO.I.H.G.S.X.
0.2021.10.93Contig11503_atContig11503--2e+0At4g03030kelch repeat-containing F-box family proteinO.I.H.G.S.X.
0.2021.10.94Contig661_atContig661--4e-23At2g3939060S ribosomal protein L35 (RPL35B)O.I.H.G.S.X.
0.2021.10.94HV10J10u_atHV10J10u--2e-4At2g24200cytosol aminopeptidaseO.I.H.G.S.X.
0.1716.90.92Contig5064_atContig5064--1e-3At2g20490NOP10O.I.H.G.S.X.
0.1716.90.94Contig12931_atContig12931--5e+0At4g13575unknown proteinO.I.H.G.S.X.
0.1615.30.94HV_CEa0014J08r2_atHV_CEa0014J08r2--4e+0At5g49050-O.I.H.G.S.X.
0.1615.30.92Contig9590_atContig9590--1e-3At1g53165ATMAP4K ALPHA1O.I.H.G.S.X.
0.1615.30.94Contig12037_atContig12037--2e-4At5g22300NIT4 (NITRILASE 4)O.I.H.G.S.X.
0.1514.10.93Contig6622_atContig6622--2e-10At1g64660ATMGL (ARABIDOPSIS THALIANA METHIONINE GAMMA-LYASE)O.I.H.G.S.X.
0.1412.90.93Contig11224_atContig11224--1e+1At5g59720HSP18.2 (heat shock protein 18.2)O.I.H.G.S.X.
0.1412.90.93rbah11g06_s_atrbah11g06--1e+0At3g21860ASK10 (ARABIDOPSIS SKP1-LIKE 10)O.I.H.G.S.X.
0.1311.60.92Contig6308_atContig6308--8e-24At1g62430ATCDS1O.I.H.G.S.X.
0.1311.60.92Contig22985_atContig22985--4e-1At4g30590plastocyanin-like domain-containing proteinO.I.H.G.S.X.
0.1210.40.94Contig1167_s_atContig1167--5e-9At3g09480histone H2B, putativeO.I.H.G.S.X.
0.119.40.91Contig26532_atContig26532--1e-1At2g30710RabGAP/TBC domain-containing proteinO.I.H.G.S.X.
0.119.40.92Contig10859_atContig10859--8e-1At2g39320OTU-like cysteine protease family proteinO.I.H.G.S.X.
0.119.40.91Contig8023_atContig8023--8e-50At5g55990CBL2 (CALCINEURIN B-LIKE 2)O.I.H.G.S.X.
0.108.40.92Contig6786_atContig6786--1e+0At1g25460oxidoreductase family proteinO.I.H.G.S.X.
0.108.40.93HW04B18u_s_atHW04B18u--8e+0At5g09560KH domain-containing proteinO.I.H.G.S.X.
0.075.80.92Contig14822_atContig14822--2e+0At1g02780emb2386 (embryo defective 2386)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.197.3GSM281748Genotype: Morex - rep1GSE11182Steptoe x Morex seedling leaf comparisonLink to GEO
3.494.8GSM238412Endosperm 4DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.494.8GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.792.7GSM238429Embryo 16DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.792.7GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
2.692.3GSM398258Martin_5d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
2.390.9GSM281750Genotype: Morex - rep3GSE11182Steptoe x Morex seedling leaf comparisonLink to GEO
2.390.9GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.390.9GSM238413Endosperm 4DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.290.3GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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