Co-expression analysis

Gene ID	Contig12377_at
Gene name
Homology with Arabidopsis	Similar to At5g59210: myosin heavy chain-related (HF=2e-1)
Module size	6 genes
NF	0.35
%ile	48.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.1	0.81	Contig12377_at	Contig12377	-	-	2e-1	At5g59210	myosin heavy chain-related	O.I.	H.G.	S.X.	Please select
0.61	78.7	0.82	Contig11969_at	Contig11969	-	-	2e-6	At5g04330	cytochrome P450, putative / ferulate-5-hydroxylase, putative	O.I.	H.G.	S.X.	Please select
0.36	47.1	0.84	Contig7673_at	Contig7673	-	-	2e-7	At1g56080	unknown protein	O.I.	H.G.	S.X.	Please select
0.29	35.5	0.80	Contig1285_s_at	Contig1285	-	-	4e-20	At4g14880	OASA1 (O-ACETYLSERINE (THIOL) LYASE (OAS-TL) ISOFORM A1)	O.I.	H.G.	S.X.	Please select
0.23	26.1	0.80	Contig22888_at	Contig22888	-	-	1e+0	At5g27944	sequence-specific DNA binding / transcription factor	O.I.	H.G.	S.X.	Please select
0.20	21.1	0.82	Contig8119_at	Contig8119	-	-	5e+0	At3g51890	protein binding / structural molecule	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.9	97.1	GSM398264	HS41-1_1d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
4.7	96.9	GSM238431	Embryo 25DAF; Seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
3.6	95.3	GSM282036	Malting_steeped_Morex_rep2	GSE11200	Expression data from malting barley seeds
3.4	94.8	GSM261074	Albina e-16 Control rep1	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.4	94.8	GSM261072	Albina f-17 Hardened rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.0	93.8	GSM282034	Malting_steeped_Morex_rep1	GSE11200	Expression data from malting barley seeds
2.9	93.4	GSM398262	HS41-1_0d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
2.8	93.1	GSM372939	genotype: Mla6 - pathogen isolates: 5874 - time: 0 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
2.8	93.1	GSM440972	Stressed awn_Rep1	GSE17669	Gene expression in the barley spike during drought stress
2.8	93.1	GSM238433	Embryo 0 h; Seed germination; Rep 2	GSE9365	Expression data from barley maturing and germinating grains

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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