| Gene ID | Contig12332_at |
| Gene name | |
| Homology with Arabidopsis | Similar to At3g50410: OBP1 (OBF BINDING PROTEIN 1) (HF=4e+0) |
| Module size | 7 genes |
| NF | 0.50 |
| %ile | 70.1 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.77 | 90.8 | 0.89 | Contig12332_at | Contig12332 | - | - | 4e+0 | At3g50410 | OBP1 (OBF BINDING PROTEIN 1) | O.I. | H.G. | S.X. | |
| 0.77 | 90.8 | 0.91 | Contig26369_at | Contig26369 | - | - | 4e+0 | At4g02620 | vacuolar ATPase subunit F family protein | O.I. | H.G. | S.X. | |
| 0.61 | 78.7 | 0.89 | Contig807_s_at | Contig807 | - | - | 6e-53 | At1g55490 | CPN60B (CHAPERONIN 60 BETA) | O.I. | H.G. | S.X. | |
| 0.48 | 63.2 | 0.91 | Contig11177_at | Contig11177 | - | - | 5e-1 | At5g53730 | harpin-induced family protein / HIN1 family protein / harpin-responsive family protein | O.I. | H.G. | S.X. | |
| 0.36 | 47.1 | 0.94 | Contig14949_at | Contig14949 | - | - | 3e-2 | At3g19100 | calcium-dependent protein kinase, putative / CDPK, putative | O.I. | H.G. | S.X. | |
| 0.28 | 35.5 | 0.92 | Contig8505_s_at | Contig8505 | - | - | 2e+0 | At5g18280 | ATAPY2 (ARABIDOPSIS THALIANA APYRASE 2) | O.I. | H.G. | S.X. | |
| 0.27 | 32.1 | 0.93 | Contig13428_at | Contig13428 | - | - | 6e-5 | At3g17160 | unknown protein | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 27.2 | 99.8 | GSM238410 | Pericarp 8DAF; seed development; Rep 1 | GSE9365 | Expression data from barley maturing and germinating grains | |
| 8.6 | 98.8 | GSM238411 | Pericarp 8DAF; seed development; Rep 2 | GSE9365 | Expression data from barley maturing and germinating grains | |
| 5.7 | 97.7 | GSM238435 | Embryo 24 h; Seed germination; Rep 2 | GSE9365 | Expression data from barley maturing and germinating grains | |
| 5.2 | 97.4 | GSM238412 | Endosperm 4DAF; Seed development; Rep 1 | GSE9365 | Expression data from barley maturing and germinating grains | |
| 4.9 | 97.1 | GSM440960 | Stressed lemma_Rep1 | GSE17669 | Gene expression in the barley spike during drought stress | |
| 4.1 | 96.2 | GSM238428 | Embryo 16DAF; Seed development; Rep 1 | GSE9365 | Expression data from barley maturing and germinating grains | |
| 3.7 | 95.5 | GSM238429 | Embryo 16DAF; Seed development; Rep 2 | GSE9365 | Expression data from barley maturing and germinating grains | |
| 3.3 | 94.6 | GSM440966 | Stressed palea_Rep1 | GSE17669 | Gene expression in the barley spike during drought stress | |
| 2.7 | 92.7 | GSM373008 | genotype: 11542 - pathogen isolates: K1 - time: 32 - rep2 | GSE14930 | Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene | |
| 2.7 | 92.7 | GSM161200 | cold treatment rep1 | GSE6993 | Barley low temperature stress | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.91 | 98.6 | GmaAffx.12286.2.S1_at | At3g50410 | - | - | 1e-11 | At5g38510 | rhomboid family protein | O.I. | H.G. | S.X. | |
| 0.77 | 90.3 | GmaAffx.68071.1.S1_at | At3g50410 | - | - | 1e-1 | At1g09530 | PIF3 (PHYTOCHROME INTERACTING FACTOR 3) | O.I. | H.G. | S.X. | |
| 0.60 | 80.7 | GmaAffx.18273.1.A1_at | At3g50410 | - | - | 1e+0 | At1g64490 | unknown protein | O.I. | H.G. | S.X. | |
| 0.55 | 76.3 | GmaAffx.67157.1.S1_at | At3g50410 | - | - | 3e-16 | At2g30950 | VAR2 (VARIEGATED 2) | O.I. | H.G. | S.X. | |
| 0.47 | 66.6 | GmaAffx.12286.1.S1_at | At3g50410 | - | - | 1e+0 | At5g63470 | NF-YC4 (NUCLEAR FACTOR Y, SUBUNIT C4) | O.I. | H.G. | S.X. | |
| 0.38 | 53.3 | Gma.13184.1.A1_at | At3g50410 | - | - | 2e-33 | At1g34000 | OHP2 (ONE-HELIX PROTEIN 2) | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Oryza_sativa |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
| Zea_mays |
Back to the CoP portal site
Back to the KAGIANA project homepage