Co-expression analysis

Gene ID Contig12195_at
Gene name
Homology with ArabidopsisSimilar to At1g67910: unknown protein (HF=3e+0)
Module size 6 genes
NF 0.33
%ile 44.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.10.94Contig12195_atContig12195--3e+0At1g67910unknown proteinO.I.H.G.S.X.
0.8394.00.95HV_CEb0017I15r2_atHV_CEb0017I15r2--8e-1At1g68760ATNUDX1 (ARABIDOPSIS THALIANA NUDIX HYDROLASE 1)O.I.H.G.S.X.
0.5066.90.95Contig15176_atContig15176--2e+0At3g47790ATATH7O.I.H.G.S.X.
0.3138.60.95Contig19174_atContig19174--4e-1At2g26970exonuclease family proteinO.I.H.G.S.X.
0.2021.10.94Contig10514_atContig10514--1e-2At5g67360ARA12O.I.H.G.S.X.
0.1311.60.95Contig16054_atContig16054--4e-1At1g06830glutaredoxin family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.398.1GSM238433Embryo 0 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
6.198.0GSM282041Control_dryseed_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
5.297.4GSM238432Embryo 0 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.897.0GSM215729gibberellin plus Yariv-reagent treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
3.895.7GSM215732gibberellin plus Yariv-reagent treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
3.895.7GSM440966Stressed palea_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
3.795.5GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
3.595.1GSM215727Control (DMSO) treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
3.494.8GSM238423Endosperm 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.494.8GSM372955genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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