Co-expression analysis

Gene ID Contig12129_at
Gene name
Homology with ArabidopsisSimilar to At4g30020: subtilase family protein (HF=2e-14)
Module size 6 genes
NF 0.56
%ile 78.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7187.10.94Contig12129_atContig12129--2e-14At4g30020subtilase family proteinO.I.H.G.S.X.
0.8092.50.94Contig8892_atContig8892flowering time control protein-4e-13At4g16280FCAO.I.H.G.S.X.
0.7187.10.94Contig18436_s_atContig18436--1e+0At2g18000TAF14 (TBP-associated factor 14)O.I.H.G.S.X.
0.6784.70.94Contig19791_atContig19791--3e-1At4g06534unknown proteinO.I.H.G.S.X.
0.4356.40.94Contig18856_atContig18856--2e-6At5g04940SUVH1 (SU(VAR)3-9 HOMOLOG 1)O.I.H.G.S.X.
0.1716.90.94Contig15181_atContig15181--5e+0At5g57170macrophage migration inhibitory factor family protein / MIF family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.198.0GSM382236Root_Control2GSE15295Mercury toxicity in barley rootsLink to GEO
5.297.4GSM261070Albina f-17 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
4.396.4GSM261064Xantha s-46 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
4.296.3GSM261076Albina e-16 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
4.196.2GSM238411Pericarp 8DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.196.2GSM238409Pericarp 4DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.795.5GSM261030Dicktoo-control-rep1GSE10329Low temperature stress in cv. DicktooLink to GEO
3.795.5GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
3.695.3GSM261041Dicktoo-deacclimation-rep3GSE10329Low temperature stress in cv. DicktooLink to GEO
3.595.1GSM261021ABA-Control-rep1GSE10328ABA experimentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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