Co-expression analysis

Gene ID	Contig12074_at
Gene name
Homology with Arabidopsis	Similar to At1g78800: glycosyl transferase family 1 protein (HF=2e-9)
Module size	6 genes
NF	0.72
%ile	92.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.1	0.92	Contig12074_at	Contig12074	-	-	2e-9	At1g78800	glycosyl transferase family 1 protein	O.I.	H.G.	S.X.	Please select
0.80	92.5	0.89	HW01L24u_s_at	HW01L24u	-	-	3e+0	At2g35820	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	84.7	0.91	Contig9195_at	Contig9195	-	-	2e-2	At1g72080	unknown protein	O.I.	H.G.	S.X.	Please select
0.57	74.9	0.88	Contig15397_at	Contig15397	-	-	2e-3	At1g23110	unknown protein	O.I.	H.G.	S.X.	Please select
0.55	72.0	0.91	Contig9948_at	Contig9948	-	-	5e-5	At2g21280	SULA	O.I.	H.G.	S.X.	Please select
0.44	58.9	0.92	Contig6780_at	Contig6780	-	-	5e-1	At4g29080	PAP2 (PHYTOCHROME-ASSOCIATED PROTEIN 2)	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
9.5	99.0	GSM382234	Root_Hg3	GSE15295	Mercury toxicity in barley roots
9.0	98.9	GSM431573	pathogen isolates: Polymyxa betae - rep3	GSE17240	Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
7.0	98.4	GSM261021	ABA-Control-rep1	GSE10328	ABA experiment
6.8	98.3	GSM382233	Root_Hg2	GSE15295	Mercury toxicity in barley roots
6.5	98.2	GSM261022	ABA-Control-rep2	GSE10328	ABA experiment
6.4	98.1	GSM431571	pathogen isolates: Polymyxa betae - rep1	GSE17240	Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
6.2	98.0	GSM431568	pathogen isolates: Mock inoculated control - rep1	GSE17240	Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
5.8	97.8	GSM382232	Root_Hg1	GSE15295	Mercury toxicity in barley roots
5.3	97.4	GSM431570	pathogen isolates: Mock inoculated control - rep3	GSE17240	Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
5.3	97.4	GSM261025	ABA-Early-rep2	GSE10328	ABA experiment

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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