Co-expression analysis

Gene ID Contig12074_at
Gene name
Homology with ArabidopsisSimilar to At1g78800: glycosyl transferase family 1 protein (HF=2e-9)
Module size 6 genes
NF 0.72
%ile 92.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.10.92Contig12074_atContig12074--2e-9At1g78800glycosyl transferase family 1 proteinO.I.H.G.S.X.
0.8092.50.89HW01L24u_s_atHW01L24u--3e+0At2g35820unknown proteinO.I.H.G.S.X.
0.6784.70.91Contig9195_atContig9195--2e-2At1g72080unknown proteinO.I.H.G.S.X.
0.5774.90.88Contig15397_atContig15397--2e-3At1g23110unknown proteinO.I.H.G.S.X.
0.5572.00.91Contig9948_atContig9948--5e-5At2g21280SULAO.I.H.G.S.X.
0.4458.90.92Contig6780_atContig6780--5e-1At4g29080PAP2 (PHYTOCHROME-ASSOCIATED PROTEIN 2)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.599.0GSM382234Root_Hg3GSE15295Mercury toxicity in barley rootsLink to GEO
9.098.9GSM431573pathogen isolates: Polymyxa betae - rep3GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betaeLink to GEO
7.098.4GSM261021ABA-Control-rep1GSE10328ABA experimentLink to GEO
6.898.3GSM382233Root_Hg2GSE15295Mercury toxicity in barley rootsLink to GEO
6.598.2GSM261022ABA-Control-rep2GSE10328ABA experimentLink to GEO
6.498.1GSM431571pathogen isolates: Polymyxa betae - rep1GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betaeLink to GEO
6.298.0GSM431568pathogen isolates: Mock inoculated control - rep1GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betaeLink to GEO
5.897.8GSM382232Root_Hg1GSE15295Mercury toxicity in barley rootsLink to GEO
5.397.4GSM431570pathogen isolates: Mock inoculated control - rep3GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betaeLink to GEO
5.397.4GSM261025ABA-Early-rep2GSE10328ABA experimentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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