Co-expression analysis

Gene ID	Contig11980_at
Gene name
Homology with Arabidopsis	Similar to At3g57920: SPL15 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 15) (HF=3e-2)
Module size	8 genes
NF	0.55
%ile	75.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.80	92.5	0.96	Contig11980_at	Contig11980	-	-	3e-2	At3g57920	SPL15 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 15)	O.I.	H.G.	S.X.	Please select
0.67	84.7	0.96	Contig5960_at	Contig5960	-	-	1e-16	At3g18880	ribosomal protein S17 family protein	O.I.	H.G.	S.X.	Please select
0.63	80.3	0.95	Contig14126_at	Contig14126	-	-	2e-6	At1g65700	small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative	O.I.	H.G.	S.X.	Please select
0.55	72.0	0.96	Contig10592_at	Contig10592	-	-	1e-2	At5g26180	NOL1/NOP2/sun family protein	O.I.	H.G.	S.X.	Please select
0.40	53.1	0.96	Contig14103_at	Contig14103	-	-	2e-1	At4g19040	EDR2	O.I.	H.G.	S.X.	Please select
0.40	53.1	0.97	Contig11977_at	Contig11977	-	-	6e-1	At5g62490	ATHVA22B	O.I.	H.G.	S.X.	Please select
0.33	42.6	0.96	Contig12784_at	Contig12784	-	-	2e-10	At1g28520	VOZ1 (VASCULAR PLANT ONE ZINC FINGER PROTEIN)	O.I.	H.G.	S.X.	Please select
0.33	42.6	0.96	Contig7886_at	Contig7886	-	-	8e+0	At5g39790	5'-AMP-activated protein kinase beta-1 subunit-related	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.0	96.0	GSM398273	Moroc9-75_0d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
3.6	95.3	GSM398275	Moroc9-75_0d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
2.7	92.7	GSM160822	38% SWC rep3	GSE6990	Barley drought stress
2.7	92.7	GSM398283	Moroc9-75_5d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
2.7	92.7	GSM398274	Moroc9-75_0d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
2.6	92.3	GSM161148	7% SWC rep3	GSE6990	Barley drought stress
2.6	92.3	GSM160831	7% SWC rep1	GSE6990	Barley drought stress
2.5	91.9	GSM398278	Moroc9-75_1d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
2.5	91.9	GSM238428	Embryo 16DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
2.5	91.9	GSM160819	38% SWC rep1	GSE6990	Barley drought stress

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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