Co-expression analysis

Gene ID Contig11814_at
Gene name
Homology with ArabidopsisSimilar to At5g44300: dormancy/auxin associated family protein (HF=2e+0)
Module size 10 genes
NF 0.66
%ile 87.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6380.30.89Contig11814_atContig11814--2e+0At5g44300dormancy/auxin associated family proteinO.I.H.G.S.X.
0.8494.30.93Contig14057_atContig14057--6e-1At5g14980esterase/lipase/thioesterase family proteinO.I.H.G.S.X.
0.7086.00.93Contig15941_atContig15941--2e-1At2g38820unknown proteinO.I.H.G.S.X.
0.7086.00.91Contig9668_atContig9668--4e+0At5g51650unknown proteinO.I.H.G.S.X.
0.6784.70.91Contig168_atContig168--9e-14At4g10340LHCB5 (LIGHT HARVESTING COMPLEX OF PHOTOSYSTEM II 5)O.I.H.G.S.X.
0.6784.70.91Contig2284_atContig2284--5e-13At2g32720CB5-B (CYTOCHROME B5 ISOFORM B)O.I.H.G.S.X.
0.6380.30.93HVSMEa0003G10r2_atHVSMEa0003G10r2--7e-1At3g50070CYCD3O.I.H.G.S.X.
0.6077.30.91Contig18560_atContig18560--2e-9At3g24590PLSP1 (plastidic type I signal peptidase 1)O.I.H.G.S.X.
0.5774.90.91Contig14309_atContig14309--7e+0At5g03390unknown proteinO.I.H.G.S.X.
0.4255.20.91HVSMEf0013J01r2_atHVSMEf0013J01r2--2e-2At2g39415F-box family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.899.1GSM215731gibberellin treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
8.698.8GSM215728gibberellin treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
8.298.7GSM215732gibberellin plus Yariv-reagent treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
6.198.0GSM215730Control (DMSO) treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
4.997.1GSM146367Maythorpe Root Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
4.796.9GSM215729gibberellin plus Yariv-reagent treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
4.696.8GSM146361Golden Promise Root Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
4.396.4GSM261079Albina e-16 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
4.296.3GSM372981genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.196.2GSM146366Maythorpe Root Salt, biological rep 1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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