Co-expression analysis

Gene ID Contig11708_at
Gene name
Homology with ArabidopsisSimilar to At4g19230: CYP707A1 (HF=1e-1)
Module size 26 genes
NF 0.20
%ile 25.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9699.40.92Contig11708_atContig11708--1e-1At4g19230CYP707A1O.I.H.G.S.X.
0.4356.40.94Contig4250_atContig4250--2e-1At1g76590zinc-binding family proteinO.I.H.G.S.X.
0.3849.50.95Contig1315_s_atContig1315--8e-14At3g16240DELTA-TIPO.I.H.G.S.X.
0.3138.60.94Contig1352_atContig1352--6e-7At3g47810MAG1 (MAIGO 1)O.I.H.G.S.X.
0.3138.60.95Contig14225_atContig14225--2e+0At1g34020transporter-relatedO.I.H.G.S.X.
0.3037.00.96Contig11867_s_atContig11867--4e-1At1g03790SOM (SOMNUS)O.I.H.G.S.X.
0.2732.10.95Contig20821_atContig20821--4e-1At4g21902unknown proteinO.I.H.G.S.X.
0.2732.10.95Contig12244_atContig12244--5e-1At1g12663-O.I.H.G.S.X.
0.2326.10.94Contig9109_atContig9109--1e+0Atmg00070-O.I.H.G.S.X.
0.2224.20.95Contig17029_atContig17029--5e+0At3g61827unknown proteinO.I.H.G.S.X.
0.2224.20.95Contig7153_atContig7153--9e-1At5g64430octicosapeptide/Phox/Bem1p (PB1) domain-containing proteinO.I.H.G.S.X.
0.2122.60.95Contig11109_atContig11109--1e-10At4g10480nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putativeO.I.H.G.S.X.
0.2021.10.96Contig17026_atContig17026--1e+0At1g01770unknown proteinO.I.H.G.S.X.
0.1919.60.96Contig9932_atContig9932--6e-7At5g03530RABC2A (RAB GTPASE HOMOLOG C2A)O.I.H.G.S.X.
0.1919.60.94Contig17556_atContig17556--8e+0At5g53940yippee family proteinO.I.H.G.S.X.
0.1919.60.94HVSMEg0011K10r2_x_atHVSMEg0011K10r2--3e+0At2g30695-O.I.H.G.S.X.
0.1818.20.94Contig2094_s_atContig2094--3e-100At5g0296040S ribosomal protein S23 (RPS23B)O.I.H.G.S.X.
0.1716.90.94Contig1934_atContig1934--7e-13At1g11840ATGLX1 (GLYOXALASE I HOMOLOG)O.I.H.G.S.X.
0.1716.90.94Contig21127_atContig21127--6e-3At3g12060unknown proteinO.I.H.G.S.X.
0.1514.10.95Contig3659_atContig3659--3e-7At4g29060emb2726 (embryo defective 2726)O.I.H.G.S.X.
0.1412.90.95Contig14153_s_atContig14153--1e-14At1g20575dolichyl-phosphate beta-D-mannosyltransferase, putative / dolichol-phosphate mannosyltransferase, putative / mannose-P-dolichol synthase, putativeO.I.H.G.S.X.
0.1311.60.93Contig26380_atContig26380--6e+0At5g67070RALFL34 (ralf-like 34)O.I.H.G.S.X.
0.1210.40.94Contig19553_atContig19553--1e-1At1g06160ORA59 (OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59)O.I.H.G.S.X.
0.1210.40.95Contig9755_atContig9755--3e-1At5g59080unknown proteinO.I.H.G.S.X.
0.119.40.94Contig16699_atContig16699--3e-1At1g33640unknown proteinO.I.H.G.S.X.
0.119.40.94HX01C23w_s_atHX01C23w--5e+0At5g17165unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.695.3GSM282034Malting_steeped_Morex_rep1GSE11200Expression data from malting barley seedsLink to GEO
3.194.1GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.093.8GSM282036Malting_steeped_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
2.893.1GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.792.7GSM1611487% SWC rep3GSE6990Barley drought stressLink to GEO
2.692.3GSM282026Malting_day1_Legacy_rep4GSE11200Expression data from malting barley seedsLink to GEO
2.591.9GSM282037Malting_day1_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
2.491.4GSM282032Malting_day1_Morex_rep1GSE11200Expression data from malting barley seedsLink to GEO
2.491.4GSM282027Malting_day1_Legacy_rep2GSE11200Expression data from malting barley seedsLink to GEO
2.491.4GSM130802salinity stress, biological rep2GSE5605Expression data from barley under salinity stress and JA treatmentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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