Co-expression analysis

Gene ID Contig11434_at
Gene name
Homology with ArabidopsisSimilar to At3g20290: ATEHD1 (EPS15 HOMOLOGY DOMAIN 1) (HF=3e-20)
Module size 6 genes
NF 0.33
%ile 44.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8092.50.93Contig11434_atContig11434--3e-20At3g20290ATEHD1 (EPS15 HOMOLOGY DOMAIN 1)O.I.H.G.S.X.
0.9198.10.92Contig11436_atContig11436--5e-23At2g03270DNA-binding protein, putativeO.I.H.G.S.X.
0.5066.90.94Contig8287_atContig8287--4e-65At2g16440DNA replication licensing factor, putativeO.I.H.G.S.X.
0.4053.10.93Contig5782_atContig5782--9e-3At5g63740zinc finger protein-relatedO.I.H.G.S.X.
0.2021.10.93Contig3527_atContig3527--4e-169At5g19990RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A)O.I.H.G.S.X.
0.119.40.93Contig23462_atContig23462--5e+0At5g43770proline-rich family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.993.4GSM431569pathogen isolates: Mock inoculated control - rep2GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betaeLink to GEO
2.893.1GSM398270HS41-1_5d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
2.792.7GSM431548pathogen isolates: Mock - rep3GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
2.792.7GSM398256Martin_3d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
2.692.3GSM398255Martin_3d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
2.591.9GSM398258Martin_5d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
2.591.9GSM398259Martin_5d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
2.591.9GSM398257Martin_3d_rep3GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
2.591.9GSM431573pathogen isolates: Polymyxa betae - rep3GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betaeLink to GEO
2.591.9GSM431551pathogen isolates: Polymyxa graminis - rep3GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO

Inter-species module comparison

A co-expression module including the rice gene, Os02g0158100, orthologous to the query gene, Contig11434_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.7591.9Os02g0158100At3g20290-EH-domain containing protein 4 (FKSG7 protein)(Hepatocellular carcinoma-associated protein 10/11)5e-64At3g20290ATEHD1 (EPS15 HOMOLOGY DOMAIN 1)O.I.H.G.S.X.
0.6181.2Os05g0397900At3g20290-Kinesin, motor region domain containing protein2e+1Atcg00720-O.I.H.G.S.X.
0.5676.3Os02g0831400At3g20290-Conserved hypothetical protein3e+0At4g19645-O.I.H.G.S.X.
0.5573.7Os12g0263100At3g20290-Zn-finger, DHHC type domain containing protein2e-4At3g22180zinc finger (DHHC type) family proteinO.I.H.G.S.X.
0.5068.0Os12g0433500At3g20290-FUSED serine/threonine kinase5e-32At1g50240-O.I.H.G.S.X.
0.2524.1Os01g0259400At3g20290-Protein kinase domain containing protein3e-15At5g18700EMB3013 (embryo defective 3013)O.I.H.G.S.X.
0.2117.9Os06g0285400At3g20290-Serine/threonine-specific kinase like protein8e-2At5g61660glycine-rich proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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