Co-expression analysis

Gene ID Contig11418_at
Gene name
Homology with ArabidopsisSimilar to At1g51270: structural molecule/ transmembrane receptor (HF=8e-3)
Module size 6 genes
NF 0.42
%ile 57.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5975.80.90Contig11418_atContig11418--8e-3At1g51270structural molecule/ transmembrane receptorO.I.H.G.S.X.
0.5066.90.91Contig10839_atContig10839--3e+0At5g03520ATRAB8CO.I.H.G.S.X.
0.4458.90.92Contig2273_atContig2273--4e+0At1g69526UbiE/COQ5 methyltransferase family proteinO.I.H.G.S.X.
0.3545.10.91Contig12766_atContig12766--2e-6At1g51690ATB ALPHAO.I.H.G.S.X.
0.2732.10.92Contig18939_atContig18939--3e-2At4g35700zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.2326.10.93Contig18407_atContig18407--2e+0At3g50450HR1 (HOMOLOG OF RPW8 1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.599.5GSM382234Root_Hg3GSE15295Mercury toxicity in barley rootsLink to GEO
14.599.5GSM238413Endosperm 4DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
13.999.5GSM238412Endosperm 4DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
8.898.9GSM372981genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
6.898.3GSM372982genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
5.597.6GSM382232Root_Hg1GSE15295Mercury toxicity in barley rootsLink to GEO
5.497.5GSM238409Pericarp 4DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.796.9GSM238429Embryo 16DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.696.8GSM372964genotype: Mla6 - pathogen isolates: K1 - time: 16 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.696.8GSM238408Pericarp 4DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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