Co-expression analysis

Gene ID Contig11372_at
Gene name
Homology with ArabidopsisSimilar to At3g27100: - (HF=5e-7)
Module size 6 genes
NF 0.46
%ile 64.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.10.96Contig11372_atContig11372--5e-7At3g27100-O.I.H.G.S.X.
0.5572.00.96Contig4715_atContig4715--1e+0At4g10810unknown proteinO.I.H.G.S.X.
0.5066.90.96Contig14154_atContig14154--2e+0At1g60320Toll-Interleukin-Resistance (TIR) domain-containing proteinO.I.H.G.S.X.
0.4762.20.96Contig15165_s_atContig15165--2e+0At3g28460unknown proteinO.I.H.G.S.X.
0.2835.50.96Contig4737_s_atContig4737--3e-29At2g35040AICARFT/IMPCHase bienzyme family proteinO.I.H.G.S.X.
0.2326.10.97Contig9785_atContig9785--9e-4At4g25620hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.995.8GSM1611487% SWC rep3GSE6990Barley drought stressLink to GEO
3.895.7GSM372967genotype: Mla6 - pathogen isolates: K1 - time: 20 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.795.5GSM161200cold treatment rep1GSE6993Barley low temperature stressLink to GEO
3.795.5GSM161221cold treatment rep3GSE6993Barley low temperature stressLink to GEO
3.695.3GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
3.093.8GSM261021ABA-Control-rep1GSE10328ABA experimentLink to GEO
2.893.1GSM372945genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
2.692.3GSM16082319% SWC rep1GSE6990Barley drought stressLink to GEO
2.692.3GSM1608317% SWC rep1GSE6990Barley drought stressLink to GEO
2.591.9GSM261024ABA-Early-rep1GSE10328ABA experimentLink to GEO

Inter-species module comparison

A co-expression module including the rice gene, Os01g0920200, orthologous to the query gene, Contig11372_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9198.9Os01g0920200At3g27100-E(Y)2 homolog (DC6)1e-13At3g27100-O.I.H.G.S.X.
0.4863.7Os03g0751000At3g27100-Protein of unknown function DUF423 family protein7e-2At2g04900unknown proteinO.I.H.G.S.X.
0.4458.1Os05g0346400At3g27100-Protein of unknown function DUF538 family protein2e-6At5g01610unknown proteinO.I.H.G.S.X.
0.3846.9Os10g0486600At3g27100-Thioredoxin-like protein 4A (Thioredoxin-like U5snRNP protein U5- 15kD) (Spliceosomal U5 snRNP-specific15 kDa protein) (DIM1 protein homolog)3e-91At5g08290YLS8O.I.H.G.S.X.
0.3644.0Os05g0508500At3g27100-Thioredoxin H2e-6At5g42980ATTRX3 (THIOREDOXIN 3)O.I.H.G.S.X.
0.3541.7Os05g0182500At3g27100-Rad6 (Ubiquitin carrier protein)1e-60At2g02760ATUBC2 (UBIQUITING-CONJUGATING ENZYME 2)O.I.H.G.S.X.
0.3236.3Os09g0411700At3g27100-PpiC-type peptidyl-prolyl cis-trans isomerasedomain containing protein2e-37At1g26550peptidyl-prolyl cis-trans isomerase PPIC-type family proteinO.I.H.G.S.X.
0.3032.7Os05g0295800At3g27100-Glyoxalase I (EC 4.4.1.5)2e-10At1g08110lactoylglutathione lyase, putative / glyoxalase I, putativeO.I.H.G.S.X.
0.3032.7Os03g0261500At3g27100-Heat shock protein DnaJ family protein3e-9At5g22080DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.
0.3032.7Os01g0966500At3g27100-The start codon is not identified.8e-6At1g32410vacuolar protein sorting 55 family protein / VPS55 family proteinO.I.H.G.S.X.
0.2931.1Os02g0176400At3g27100-Conserved hypothetical protein3e-5At4g29850unknown proteinO.I.H.G.S.X.
0.2931.1Os08g0191700At3g27100-Glyoxalase I family protein2e-13At1g11840ATGLX1 (GLYOXALASE I HOMOLOG)O.I.H.G.S.X.
0.2831.1Os02g0551900At3g27100-Zn-finger, C2H2 type domain containing protein2e-7At4g06634zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.2831.1Os03g0111500At3g27100-TA6 protein (Fragment)2e+0At2g13125unknown proteinO.I.H.G.S.X.
0.2625.6Os02g0510100At3g27100-The start codon is not identified.6e-18At2g43810small nuclear ribonucleoprotein F, putative / U6 snRNA-associated Sm-like protein, putative / Sm protein F, putativeO.I.H.G.S.X.
0.2524.1Os01g0331900At3g27100-Eukaryotic protein of unknown function DUF846family protein5e-26At1g09330unknown proteinO.I.H.G.S.X.
0.2524.1Os02g0634800At3g27100-Ubiquitin-conjugating enzymes domain containingprotein3e-42At5g25760PEX4 (PEROXIN4)O.I.H.G.S.X.
0.2422.4Os01g0834400At3g27100-HAP31e-17At5g47640NF-YB2 (NUCLEAR FACTOR Y, SUBUNIT B2)O.I.H.G.S.X.
0.2219.4Os08g0366100At3g27100-EDF-1 protein (HMBF1alpha) (Endothelialdifferentiation-related factor 1, isoform alpha)(Fragment)6e-11At2g42680MBF1A (MULTIPROTEIN BRIDGING FACTOR 1A)O.I.H.G.S.X.
0.2117.9Os02g0820700At3g27100-Bet1-like SNARE 1-1 (AtBET11) (Bet1/Sft1-likeSNARE 14a) (AtBS14a)3e-18At3g58170BS14A (BET1P/SFT1P-LIKE PROTEIN 14A)O.I.H.G.S.X.
0.2117.9Os01g0948300At3g27100-Cellular retinaldehyde-binding)/triple function,C-terminal domain containing protein9e+0At3g30370-O.I.H.G.S.X.
0.2016.5Os03g0322500At3g27100-14 kDa zinc-binding protein (Protein kinase Cinhibitor) (PKCI)1e-1At1g31160zinc-binding protein, putative / protein kinase C inhibitor, putativeO.I.H.G.S.X.
0.2016.5Os03g0756800At3g27100-Protein of unknown function UPF0139 family protein5e+0At5g52901unknown proteinO.I.H.G.S.X.
0.2016.5Os05g0455600At3g27100-Prenylated rab acceptor PRA1 family protein1e-2At5g02040PRA1.A1 (PRENYLATED RAB ACCEPTOR 1.A1)O.I.H.G.S.X.
0.2016.5Os01g0857700At3g27100-Cell cycle control protein cwf142e-19At4g21110G10 family proteinO.I.H.G.S.X.
0.1813.7Os07g0631000At3g27100-Protein of unknown function DUF298 family protein3e+0At3g20170armadillo/beta-catenin repeat family proteinO.I.H.G.S.X.
0.1813.7Os06g0106100At3g27100-Cwf15/Cwc15 cell cycle control protein familyprotein6e-10At3g13200EMB2769 (EMBRYO DEFECTIVE 2769)O.I.H.G.S.X.
0.1712.6Os07g0585100At3g27100-Mo25 family protein1e-19At5g47540bindingO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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