Co-expression analysis

Gene ID Contig11350_at
Gene name
Homology with ArabidopsisSimilar to At3g21090: ABC transporter family protein (HF=3e-7)
Module size 6 genes
NF 0.28
%ile 36.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5066.90.86Contig11350_atContig11350--3e-7At3g21090ABC transporter family proteinO.I.H.G.S.X.
0.4661.00.86Contig9731_atContig9731--4e+0At4g18000unknown proteinO.I.H.G.S.X.
0.3037.00.84Contig22810_x_atContig22810--6e+0At5g09380DNA-directed RNA polymerase III RPC4 family proteinO.I.H.G.S.X.
0.2528.90.89HV_CEb0011B04r2_s_atHV_CEb0011B04r2--9e+0At5g43540zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.1716.90.89Contig10752_atContig10752--3e-9At2g44900armadillo/beta-catenin repeat family protein / F-box family proteinO.I.H.G.S.X.
0.1615.30.86rbags1f20_x_atrbags1f20--2e+0At3g33494unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.797.7GSM261022ABA-Control-rep2GSE10328ABA experimentLink to GEO
5.097.2GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.897.0GSM261040Dicktoo-deacclimation-rep2GSE10329Low temperature stress in cv. DicktooLink to GEO
4.796.9GSM16081938% SWC rep1GSE6990Barley drought stressLink to GEO
4.396.4GSM16082238% SWC rep3GSE6990Barley drought stressLink to GEO
4.096.0GSM261021ABA-Control-rep1GSE10328ABA experimentLink to GEO
3.795.5GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.695.3GSM238429Embryo 16DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.695.3GSM261027ABA-Late-rep1GSE10328ABA experimentLink to GEO
3.595.1GSM261032Dicktoo control-rep3GSE10329Low temperature stress in cv. DicktooLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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