Co-expression analysis

Gene ID	Contig11250_s_at
Gene name
Homology with Arabidopsis	Similar to At5g22810: GDSL-motif lipase, putative (HF=4e+0)
Module size	6 genes
NF	0.21
%ile	26.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	66.9	0.89	Contig11250_s_at	Contig11250	-	-	4e+0	At5g22810	GDSL-motif lipase, putative	O.I.	H.G.	S.X.	Please select
0.50	66.9	0.91	Contig11252_at	Contig11252	-	-	2e+0	At1g01130	unknown protein	O.I.	H.G.	S.X.	Please select
0.23	26.1	0.90	Contig18428_at	Contig18428	-	-	7e-7	At1g15060	-	O.I.	H.G.	S.X.	Please select
0.21	22.6	0.87	Contig3140_at	Contig3140	-	-	5e+0	At1g68870	unknown protein	O.I.	H.G.	S.X.	Please select
0.14	12.9	0.89	Contig2873_s_at	Contig2873	-	-	2e-4	At1g31630	AGL86 (AGAMOUS-LIKE 86)	O.I.	H.G.	S.X.	Please select
0.10	8.4	0.87	Contig8056_at	Contig8056	-	-	4e-4	At5g42890	SCP2 (STEROL CARRIER PROTEIN 2)	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
11.8	99.3	GSM71145	OWB-D unstress replicate 1	GSE3170	Barley single feature polymorphisms and drought stress gene expression
10.1	99.1	GSM71146	OWB-D unstress replicate 2	GSE3170	Barley single feature polymorphisms and drought stress gene expression
9.2	99.0	GSM71147	OWB-D unstress replicate 3	GSE3170	Barley single feature polymorphisms and drought stress gene expression
5.6	97.7	GSM363461	Control (C) - rep2	GSE14521	Late response to boron toxicity in barley leaves
4.5	96.7	GSM68902	27 h control replicate 2	GSE3097	Barley1 salinity stress study
4.2	96.3	GSM68890	3 h control replicate 2	GSE3097	Barley1 salinity stress study
4.0	96.0	GSM398259	Martin_5d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
3.8	95.7	GSM363465	5 mM B(OH)3 treatment (5B) - rep3	GSE14521	Late response to boron toxicity in barley leaves
3.4	94.8	GSM363463	5 mM B(OH)3 treatment (5B) - rep1	GSE14521	Late response to boron toxicity in barley leaves
3.4	94.8	GSM398260	Martin_5d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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