Co-expression analysis

Gene ID Contig11179_at
Gene name
Homology with ArabidopsisSimilar to At5g05730: ASA1 (ANTHRANILATE SYNTHASE ALPHA SUBUNIT 1) (HF=5e-8)
Module size 11 genes
NF 0.37
%ile 50.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8795.00.95Contig11179_atContig11179--5e-8At5g05730ASA1 (ANTHRANILATE SYNTHASE ALPHA SUBUNIT 1)O.I.H.G.S.X.
0.5066.90.97Contig4271_atContig4271--2e+0At4g09440unknown proteinO.I.H.G.S.X.
0.4863.20.97Contig3120_atContig3120--4e-2At4g20260DREPP plasma membrane polypeptide family proteinO.I.H.G.S.X.
0.4762.20.97HB24H11r_s_atHB24H11r--8e-1At3g10590myb family transcription factorO.I.H.G.S.X.
0.4458.90.96Contig10541_atContig10541--5e+0At5g53030unknown proteinO.I.H.G.S.X.
0.3342.60.96Contig5257_atContig5257--1e+0At4g00200DNA bindingO.I.H.G.S.X.
0.3138.60.97Contig11017_atContig11017--1e+0At1g15840unknown proteinO.I.H.G.S.X.
0.3037.00.96Contig3410_atContig3410--3e+0At5g65260polyadenylate-binding protein family protein / PABP family proteinO.I.H.G.S.X.
0.2935.50.96Contig344_atContig344--5e-1At1g71520AP2 domain-containing transcription factor, putativeO.I.H.G.S.X.
0.2732.10.95Contig665_s_atContig665--2e-20At1g07820histone H4O.I.H.G.S.X.
0.2021.10.96Contig2828_atContig2828--2e-50At5g63400ADK1 (ADENYLATE KINASE 1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.998.9GSM238417Endosperm 16DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
5.897.8GSM238416Endosperm 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.895.7GSM238418Endosperm 25DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.394.6GSM238419Endosperm 25DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.591.9GSM238411Pericarp 8DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.491.4GSM238408Pericarp 4DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.491.4GSM382235Root_Control1GSE15295Mercury toxicity in barley rootsLink to GEO
2.491.4GSM16081938% SWC rep1GSE6990Barley drought stressLink to GEO
2.390.9GSM16082319% SWC rep1GSE6990Barley drought stressLink to GEO
2.390.9GSM419982Seed_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spikeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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