Co-expression analysis

Gene ID Contig11163_s_at
Gene name
Homology with ArabidopsisSimilar to At1g26800: zinc finger (C3HC4-type RING finger) family protein (HF=2e+0)
Module size 6 genes
NF 0.66
%ile 87.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.3342.60.86Contig11163_s_atContig11163--2e+0At1g26800zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.7388.70.90Contig9052_atContig9052--1e-4At1g08470strictosidine synthase family proteinO.I.H.G.S.X.
0.6784.70.88Contig20457_atContig20457--5e+0At3g04640glycine-rich proteinO.I.H.G.S.X.
0.6784.70.89Contig9050_atContig9050--8e-6At4g31750WIN2 (HOPW1-1-INTERACTING 2)O.I.H.G.S.X.
0.6784.70.91Contig11327_atContig11327--3e+1At5g11140-O.I.H.G.S.X.
0.5975.80.87HC02E04_T3_atHC02E04_T3--8e+0At1g63060unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.298.0GSM261038Dicktoo-subzero-rep3GSE10329Low temperature stress in cv. DicktooLink to GEO
5.497.5GSM372962genotype: Mla6 - pathogen isolates: K1 - time: 16 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
5.497.5GSM16082619% SWC rep3GSE6990Barley drought stressLink to GEO
5.197.3GSM16081938% SWC rep1GSE6990Barley drought stressLink to GEO
4.796.9GSM16082319% SWC rep1GSE6990Barley drought stressLink to GEO
4.796.9GSM160815drought control rep3GSE6990Barley drought stressLink to GEO
3.895.7GSM16082238% SWC rep3GSE6990Barley drought stressLink to GEO
3.895.7GSM1611487% SWC rep3GSE6990Barley drought stressLink to GEO
3.895.7GSM1608317% SWC rep1GSE6990Barley drought stressLink to GEO
3.795.5GSM261027ABA-Late-rep1GSE10328ABA experimentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage