Co-expression analysis

Gene ID Contig11158_at
Gene name
Homology with ArabidopsisSimilar to At2g30740: serine/threonine protein kinase, putative (HF=6e-48)
Module size 12 genes
NF 0.49
%ile 68.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7689.80.89Contig11158_atContig11158--6e-48At2g30740serine/threonine protein kinase, putativeO.I.H.G.S.X.
0.6178.70.88Contig23913_atContig23913--4e-1At1g06980unknown proteinO.I.H.G.S.X.
0.6077.30.88Contig12704_atContig12704--9e-2At3g53470unknown proteinO.I.H.G.S.X.
0.5874.90.90Contig20673_atContig20673--2e+0At5g63580FLS2 (FLAVONOL SYNTHASE 2)O.I.H.G.S.X.
0.5774.90.89HVSMEi0003I03r2_x_atHVSMEi0003I03r2--6e+0At5g48220indole-3-glycerol phosphate synthase, putativeO.I.H.G.S.X.
0.5268.30.89HR01G08u_atHR01G08u--1e+1At5g03010kelch repeat-containing proteinO.I.H.G.S.X.
0.4863.20.89Contig14300_atContig14300--2e+0At4g30980basic helix-loop-helix (bHLH) family proteinO.I.H.G.S.X.
0.4255.20.89Contig24112_atContig24112--1e+0At4g29340PRF4 (PROFILIN 4)O.I.H.G.S.X.
0.4053.10.88Contig6871_s_atContig6871--6e-11At3g22290unknown proteinO.I.H.G.S.X.
0.3950.50.88HR01N23u_atHR01N23u--3e+0At1g02360chitinase, putativeO.I.H.G.S.X.
0.3950.50.89Contig15497_atContig15497--7e+0At5g62576unknown proteinO.I.H.G.S.X.
0.3647.10.88Contig1860_s_atContig1860--2e-3At5g66390peroxidase 72 (PER72) (P72) (PRXR8)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.899.4GSM382235Root_Control1GSE15295Mercury toxicity in barley rootsLink to GEO
10.999.2GSM382234Root_Hg3GSE15295Mercury toxicity in barley rootsLink to GEO
8.498.8GSM382232Root_Hg1GSE15295Mercury toxicity in barley rootsLink to GEO
8.498.8GSM382233Root_Hg2GSE15295Mercury toxicity in barley rootsLink to GEO
7.198.4GSM382236Root_Control2GSE15295Mercury toxicity in barley rootsLink to GEO
4.596.7GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
4.196.2GSM261032Dicktoo control-rep3GSE10329Low temperature stress in cv. DicktooLink to GEO
3.394.6GSM146364Maythorpe Root Control, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
3.294.3GSM146365Maythorpe Root Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
3.194.1GSM146358Golden Promise Root Control, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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