Co-expression analysis

Gene ID Contig11084_at
Gene name
Homology with ArabidopsisSimilar to At4g35470: leucine-rich repeat family protein (HF=2e-4)
Module size 11 genes
NF 0.35
%ile 47.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9095.70.87Contig11084_atContig11084--2e-4At4g35470leucine-rich repeat family proteinO.I.H.G.S.X.
0.5975.80.91Contig2222_atContig2222--0At1g54270EIF4A-2O.I.H.G.S.X.
0.5975.80.93Contig314_atContig314--6e-23At5g46180delta-OATO.I.H.G.S.X.
0.5066.90.90Contig8362_atContig8362--9e+0At5g54500FQR1 (FLAVODOXIN-LIKE QUINONE REDUCTASE 1)O.I.H.G.S.X.
0.4053.10.92Contig1938_s_atContig1938--2e-49At4g1739060S ribosomal protein L15 (RPL15B)O.I.H.G.S.X.
0.3138.60.92Contig10238_atContig10238--4e+0At4g04680-O.I.H.G.S.X.
0.2935.50.91HVSMEa0006D13r2_atHVSMEa0006D13r2--5e-1At5g42190ASK2 (ARABIDOPSIS SKP1-LIKE 2)O.I.H.G.S.X.
0.2630.40.91Contig11764_atContig11764--7e-1At4g06634zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.2528.90.92Contig8599_atContig8599--2e-98At2g42880ATMPK20O.I.H.G.S.X.
0.1615.30.91Contig21393_atContig21393--7e+0At5g26617-O.I.H.G.S.X.
0.1412.90.88Contig8390_s_atContig8390--6e+0Atmg01300-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
20.799.7GSM215729gibberellin plus Yariv-reagent treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
16.199.6GSM261043before 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
15.799.6GSM261044before 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
14.799.5GSM215732gibberellin plus Yariv-reagent treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
9.799.0GSM261067Xantha s-46 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
6.097.9GSM261073Albina f-17 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
5.797.7GSM215727Control (DMSO) treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
4.897.0GSM261042before 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
4.897.0GSM261079Albina e-16 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
4.496.6GSM215728gibberellin treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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