Co-expression analysis

Gene ID Contig10972_at
Gene name
Homology with ArabidopsisSimilar to At1g32500: ATNAP6 (NON-INTRINSIC ABC PROTEIN 6) (HF=1e-5)
Module size 6 genes
NF 0.55
%ile 76.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8394.00.91Contig10972_atContig10972--1e-5At1g32500ATNAP6 (NON-INTRINSIC ABC PROTEIN 6)O.I.H.G.S.X.
0.6784.70.90Contig16253_atContig16253--7e+0At5g48515-O.I.H.G.S.X.
0.5572.00.90Contig11287_s_atContig11287--1e+0At5g15960KIN1O.I.H.G.S.X.
0.5066.90.92Contig9975_atContig9975--1e+0At1g27435unknown proteinO.I.H.G.S.X.
0.4053.10.91Contig20219_atContig20219--1e-2At3g24770CLE41 (CLAVATA3/ESR-RELATED 41)O.I.H.G.S.X.
0.2528.90.92Contig11995_atContig11995--4e-1At2g29050ATRBL1 (Arabidopsis thaliana Rhomboid-like 1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.199.1GSM215732gibberellin plus Yariv-reagent treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
6.198.0GSM363461Control (C) - rep2GSE14521Late response to boron toxicity in barley leavesLink to GEO
6.198.0GSM215730Control (DMSO) treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
5.997.9GSM419980Awn_Rep3GSE16754Comparative transcriptional profiling of organs of the barley spikeLink to GEO
5.997.9GSM440971Control awn_Rep3GSE17669Gene expression in the barley spike during drought stressLink to GEO
5.797.7GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
5.497.5GSM419979Awn_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spikeLink to GEO
5.497.5GSM440970Control awn_Rep2GSE17669Gene expression in the barley spike during drought stressLink to GEO
5.397.4GSM431549pathogen isolates: Polymyxa graminis - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
4.997.1GSM215729gibberellin plus Yariv-reagent treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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