Co-expression analysis

Gene ID Contig10954_at
Gene name
Homology with ArabidopsisSimilar to At3g21175: ZML1 (ZIM-LIKE 1) (HF=4e+0)
Module size 6 genes
NF 0.57
%ile 78.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6784.70.96Contig10954_atContig10954--4e+0At3g21175ZML1 (ZIM-LIKE 1)O.I.H.G.S.X.
0.6077.30.97Contig4737_s_atContig4737--3e-29At2g35040AICARFT/IMPCHase bienzyme family proteinO.I.H.G.S.X.
0.5369.70.97Contig9632_atContig9632--1e-1At1g78370ATGSTU20 (GLUTATHIONE S-TRANSFERASE TAU 20)O.I.H.G.S.X.
0.5369.70.96Contig12594_atContig12594--3e+0At5g11990proline-rich family proteinO.I.H.G.S.X.
0.5066.90.96Contig416_x_atContig416--5e-29At4g24190SHD (SHEPHERD)O.I.H.G.S.X.
0.4053.10.96Contig4763_atContig4763--3e-7At4g39960DNAJ heat shock family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.897.8GSM282038Malting_kilned_Morex_rep1GSE11200Expression data from malting barley seedsLink to GEO
4.196.2GSM382237Root_Control3GSE15295Mercury toxicity in barley rootsLink to GEO
4.096.0GSM282040Malting_kilned_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
3.895.7GSM382236Root_Control2GSE15295Mercury toxicity in barley rootsLink to GEO
3.695.3GSM261038Dicktoo-subzero-rep3GSE10329Low temperature stress in cv. DicktooLink to GEO
3.394.6GSM238421Endosperm 0 h; Seed germination Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.394.6GSM372967genotype: Mla6 - pathogen isolates: K1 - time: 20 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.294.3GSM261054Bonus Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.194.1GSM261055Bonus Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
2.893.1GSM382235Root_Control1GSE15295Mercury toxicity in barley rootsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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