Co-expression analysis

Gene ID Contig10947_at
Gene name
Homology with ArabidopsisSimilar to At5g27200: ACP5 (acyl carrier protein 5) (HF=2e+0)
Module size 26 genes
NF 0.48
%ile 66.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9699.40.93Contig10947_atContig10947--2e+0At5g27200ACP5 (acyl carrier protein 5)O.I.H.G.S.X.
0.6480.90.93Contig6698_atContig6698--9e-19At1g20330SMT2 (STEROL METHYLTRANSFERASE 2)O.I.H.G.S.X.
0.6178.70.94Contig20730_s_atContig20730--5e-3At1g73885unknown proteinO.I.H.G.S.X.
0.6077.30.93Contig17002_atContig17002--1e+0At2g26670TED4 (REVERSAL OF THE DET PHENOTYPE 4)O.I.H.G.S.X.
0.5470.30.93Contig19854_s_atContig19854--2e+0At2g40085unknown proteinO.I.H.G.S.X.
0.5268.30.93Contig26569_atContig26569--2e-5At5g53045-O.I.H.G.S.X.
0.5167.50.93Contig6985_atContig6985--6e-9At3g06610DNA-binding enhancer protein-relatedO.I.H.G.S.X.
0.5167.50.93EBro05_SQ003_E05_atEBro05_SQ003_E05--3e+0At5g47190ribosomal protein L19 family proteinO.I.H.G.S.X.
0.5167.50.92Contig12873_atContig12873--6e+0At5g50430UBC33 (ubiquitin-conjugating enzyme 33)O.I.H.G.S.X.
0.5066.90.92Contig2596_atContig2596--1e-114At1g29310P-P-bond-hydrolysis-driven protein transmembrane transporterO.I.H.G.S.X.
0.4963.70.94Contig44_atContig44--3e-23At5g02500HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)O.I.H.G.S.X.
0.4863.20.94Contig7511_atContig7511--3e+0At4g05530IBR1 (INDOLE-3-BUTYRIC ACID RESPONSE 1)O.I.H.G.S.X.
0.4762.20.93Contig9960_atContig9960aluminum activated citrate transporter-4e-2At3g08040FRD3 (FERRIC REDUCTASE DEFECTIVE 3)O.I.H.G.S.X.
0.4762.20.92Contig10423_atContig10423--1e-20At2g35170MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein /phosphatidylinositol-4-phosphate 5-kinase-relatedO.I.H.G.S.X.
0.4458.90.93Contig9446_atContig9446--1e-11At2g16860GCIP-interacting family proteinO.I.H.G.S.X.
0.4458.90.93Contig2491_atContig2491--1e+1At5g52770heavy-metal-associated protein-relatedO.I.H.G.S.X.
0.4255.20.94Contig9449_atContig9449--3e-18At2g27350OTU-like cysteine protease family proteinO.I.H.G.S.X.
0.4153.90.92Contig17320_atContig17320--1e-1At3g61040CYP76C7O.I.H.G.S.X.
0.4153.90.93Contig18644_atContig18644--1e+0At4g13210lyase/ pectate lyaseO.I.H.G.S.X.
0.4053.10.95Contig12345_atContig12345--2e-29At4g17300NS1O.I.H.G.S.X.
0.4053.10.93Contig14495_atContig14495--2e+0At5g1520040S ribosomal protein S9 (RPS9B)O.I.H.G.S.X.
0.3647.10.95Contig8511_atContig8511--5e+0At5g44850-O.I.H.G.S.X.
0.3647.10.95Contig15548_atContig15548--2e-7At2g38000chaperone protein dnaJ-relatedO.I.H.G.S.X.
0.3342.60.94Contig8498_atContig8498--6e-8At4g36390radical SAM domain-containing protein / TRAM domain-containing proteinO.I.H.G.S.X.
0.3240.30.93Contig16379_s_atContig16379--3e-1At2g44080ARL (ARGOS-LIKE)O.I.H.G.S.X.
0.3037.00.93Contig12644_atContig12644--1e+0At4g02430pre-mRNA splicing factor, putative / SR1 protein, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.699.5GSM238415Endosperm 8DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.296.3GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
3.695.3GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
3.394.6GSM215730Control (DMSO) treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
3.294.3GSM238413Endosperm 4DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.294.3GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
2.893.1GSM440980Stressed seed_Rep3GSE17669Gene expression in the barley spike during drought stressLink to GEO
2.692.3GSM215732gibberellin plus Yariv-reagent treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
2.591.9GSM238412Endosperm 4DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.491.4GSM215727Control (DMSO) treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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