Co-expression analysis

Gene ID	Contig10932_at
Gene name
Homology with Arabidopsis	Similar to At4g27745: - (HF=8e-15)
Module size	6 genes
NF	0.60
%ile	82.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.73	88.7	0.96	Contig10932_at	Contig10932	-	-	8e-15	At4g27745	-	O.I.	H.G.	S.X.	Please select
0.83	94.0	0.96	Contig3277_at	Contig3277	-	-	1e-46	At5g57655	xylose isomerase family protein	O.I.	H.G.	S.X.	Please select
0.77	90.8	0.96	Contig3276_s_at	Contig3276	CesA2 protein	-	2e-2	At4g28890	protein binding / ubiquitin-protein ligase/ zinc ion binding	O.I.	H.G.	S.X.	Please select
0.57	74.9	0.96	Contig5050_s_at	Contig5050	-	-	8e-2	At1g26920	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	58.9	0.96	Contig23795_at	Contig23795	-	-	1e+1	At5g49220	unknown protein	O.I.	H.G.	S.X.	Please select
0.32	40.3	0.96	Contig4432_at	Contig4432	-	-	2e-4	At3g53460	CP29	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.7	98.3	GSM261022	ABA-Control-rep2	GSE10328	ABA experiment
6.0	97.9	GSM261025	ABA-Early-rep2	GSE10328	ABA experiment
6.0	97.9	GSM160819	38% SWC rep1	GSE6990	Barley drought stress
6.0	97.9	GSM261021	ABA-Control-rep1	GSE10328	ABA experiment
5.9	97.9	GSM261024	ABA-Early-rep1	GSE10328	ABA experiment
5.8	97.8	GSM261026	ABA-Early-rep3	GSE10328	ABA experiment
4.1	96.2	GSM130806	JA and salinity stress, biological rep2	GSE5605	Expression data from barley under salinity stress and JA treatment
4.1	96.2	GSM160822	38% SWC rep3	GSE6990	Barley drought stress
3.9	95.8	GSM71148	OWB-R unstress replicate 1	GSE3170	Barley single feature polymorphisms and drought stress gene expression
3.9	95.8	GSM160815	drought control rep3	GSE6990	Barley drought stress

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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