Co-expression analysis

Gene ID Contig10932_at
Gene name
Homology with ArabidopsisSimilar to At4g27745: - (HF=8e-15)
Module size 6 genes
NF 0.60
%ile 82.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8394.00.96Contig3277_atContig3277--1e-46At5g57655xylose isomerase family proteinO.I.H.G.S.X.
0.7790.80.96Contig3276_s_atContig3276CesA2 protein-2e-2At4g28890protein binding / ubiquitin-protein ligase/ zinc ion bindingO.I.H.G.S.X.
0.5774.90.96Contig5050_s_atContig5050--8e-2At1g26920unknown proteinO.I.H.G.S.X.
0.4458.90.96Contig23795_atContig23795--1e+1At5g49220unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.798.3GSM261022ABA-Control-rep2GSE10328ABA experimentLink to GEO
6.097.9GSM261025ABA-Early-rep2GSE10328ABA experimentLink to GEO
6.097.9GSM16081938% SWC rep1GSE6990Barley drought stressLink to GEO
6.097.9GSM261021ABA-Control-rep1GSE10328ABA experimentLink to GEO
5.997.9GSM261024ABA-Early-rep1GSE10328ABA experimentLink to GEO
5.897.8GSM261026ABA-Early-rep3GSE10328ABA experimentLink to GEO
4.196.2GSM130806JA and salinity stress, biological rep2GSE5605Expression data from barley under salinity stress and JA treatmentLink to GEO
4.196.2GSM16082238% SWC rep3GSE6990Barley drought stressLink to GEO
3.995.8GSM71148OWB-R unstress replicate 1GSE3170 Barley single feature polymorphisms and drought stress gene expressionLink to GEO
3.995.8GSM160815drought control rep3GSE6990Barley drought stressLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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