Co-expression analysis

Gene ID Contig10823_at
Gene name
Homology with ArabidopsisSimilar to At5g62627: - (HF=2e+0)
Module size 6 genes
NF 0.51
%ile 71.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8394.00.95Contig10823_atContig10823--2e+0At5g62627-O.I.H.G.S.X.
0.6784.70.94Contig13602_atContig13602--2e-15At5g49555amine oxidase-relatedO.I.H.G.S.X.
0.4661.00.93Contig14492_atContig14492--4e-10At3g13490OVA5 (OVULE ABORTION 5)O.I.H.G.S.X.
0.4661.00.94Contig10423_atContig10423--1e-20At2g35170MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein /phosphatidylinositol-4-phosphate 5-kinase-relatedO.I.H.G.S.X.
0.3342.60.95Contig9960_atContig9960aluminum activated citrate transporter-4e-2At3g08040FRD3 (FERRIC REDUCTASE DEFECTIVE 3)O.I.H.G.S.X.
0.2935.50.94Contig6698_atContig6698--9e-19At1g20330SMT2 (STEROL METHYLTRANSFERASE 2)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.997.1GSM382234Root_Hg3GSE15295Mercury toxicity in barley rootsLink to GEO
3.995.8GSM1611487% SWC rep3GSE6990Barley drought stressLink to GEO
3.895.7GSM261079Albina e-16 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.294.3GSM282038Malting_kilned_Morex_rep1GSE11200Expression data from malting barley seedsLink to GEO
2.993.4GSM440968Stressed palea_Rep3GSE17669Gene expression in the barley spike during drought stressLink to GEO
2.893.1GSM282025Control_dryseed_Morex_rep1GSE11200Expression data from malting barley seedsLink to GEO
2.792.7GSM1608317% SWC rep1GSE6990Barley drought stressLink to GEO
2.692.3GSM282041Control_dryseed_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
2.591.9GSM440966Stressed palea_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
2.591.9GSM440961Stressed lemma_Rep2GSE17669Gene expression in the barley spike during drought stressLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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