Co-expression analysis

Gene ID	Contig10728_at
Gene name
Homology with Arabidopsis	Similar to At5g04520: unknown protein (HF=4e+0)
Module size	6 genes
NF	0.71
%ile	92.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.83	94.0	0.90	Contig10728_at	Contig10728	-	-	4e+0	At5g04520	unknown protein	O.I.	H.G.	S.X.	Please select
0.83	94.0	0.91	HV05L09r_s_at	HV05L09r	-	-	1e-3	At2g45200	GOS12 (GOLGI SNARE 12)	O.I.	H.G.	S.X.	Please select
0.77	90.8	0.91	HV05M01u_at	HV05M01u	-	-	8e+0	At5g41700	UBC8 (UBIQUITIN CONJUGATING ENZYME 8)	O.I.	H.G.	S.X.	Please select
0.67	84.7	0.91	Contig7753_at	Contig7753	-	-	7e+0	At1g29395	COR414-TM1	O.I.	H.G.	S.X.	Please select
0.55	72.0	0.92	Contig2490_at	Contig2490	-	-	1e-6	At1g62660	beta-fructosidase (BFRUCT3) / beta-fructofuranosidase / invertase, vacuolar	O.I.	H.G.	S.X.	Please select
0.31	38.6	0.93	Contig16389_at	Contig16389	-	-	4e-9	At3g20440	alpha-amylase/ catalytic/ cation binding	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.7	97.7	GSM372955	genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.1	96.2	GSM372945	genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.7	95.5	GSM372954	genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.7	95.5	GSM372953	genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.5	95.1	GSM261021	ABA-Control-rep1	GSE10328	ABA experiment
3.4	94.8	GSM440974	Stressed awn_Rep3	GSE17669	Gene expression in the barley spike during drought stress
3.2	94.3	GSM261022	ABA-Control-rep2	GSE10328	ABA experiment
3.1	94.1	GSM372949	genotype: Mla6 - pathogen isolates: 5874 - time: 20 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.1	94.1	GSM372952	genotype: Mla6 - pathogen isolates: 5874 - time: 24 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
2.9	93.4	GSM372947	genotype: Mla6 - pathogen isolates: 5874 - time: 20 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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