| Gene ID | Contig10699_at |
| Gene name | Mg-protoporphyrin IX |
| Homology with Arabidopsis | Similar to At1g08520: CHLD (HF=2e-23) |
| Module size | 6 genes |
| NF | 0.56 |
| %ile | 78.1 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.40 | 53.1 | 0.89 | Contig10699_at | Contig10699 | Mg-protoporphyrin IX | - | 2e-23 | At1g08520 | CHLD | O.I. | H.G. | S.X. | |
| 0.91 | 98.1 | 0.89 | Contig807_s_at | Contig807 | - | - | 6e-53 | At1g55490 | CPN60B (CHAPERONIN 60 BETA) | O.I. | H.G. | S.X. | |
| 0.67 | 84.7 | 0.91 | Contig12332_at | Contig12332 | - | - | 4e+0 | At3g50410 | OBP1 (OBF BINDING PROTEIN 1) | O.I. | H.G. | S.X. | |
| 0.57 | 74.9 | 0.89 | Contig13202_at | Contig13202 | - | - | 2e+0 | At3g02150 | PTF1 (PLASTID TRANSCRIPTION FACTOR 1) | O.I. | H.G. | S.X. | |
| 0.40 | 53.1 | 0.91 | Contig26369_at | Contig26369 | - | - | 4e+0 | At4g02620 | vacuolar ATPase subunit F family protein | O.I. | H.G. | S.X. | |
| 0.33 | 42.6 | 0.91 | Contig11177_at | Contig11177 | - | - | 5e-1 | At5g53730 | harpin-induced family protein / HIN1 family protein / harpin-responsive family protein | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 32.4 | 99.9 | GSM238410 | Pericarp 8DAF; seed development; Rep 1 | GSE9365 | Expression data from barley maturing and germinating grains | |
| 11.6 | 99.3 | GSM238411 | Pericarp 8DAF; seed development; Rep 2 | GSE9365 | Expression data from barley maturing and germinating grains | |
| 8.6 | 98.8 | GSM398262 | HS41-1_0d_rep2 | GSE15970 | Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes | |
| 6.5 | 98.2 | GSM238435 | Embryo 24 h; Seed germination; Rep 2 | GSE9365 | Expression data from barley maturing and germinating grains | |
| 6.5 | 98.2 | GSM238409 | Pericarp 4DAF; seed development; Rep 2 | GSE9365 | Expression data from barley maturing and germinating grains | |
| 6.1 | 98.0 | GSM146373 | Golden Promise shoot Salt, biological rep 2 | GSE6325 | Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise | |
| 5.1 | 97.3 | GSM238412 | Endosperm 4DAF; Seed development; Rep 1 | GSE9365 | Expression data from barley maturing and germinating grains | |
| 4.2 | 96.3 | GSM431573 | pathogen isolates: Polymyxa betae - rep3 | GSE17240 | Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae | |
| 4.1 | 96.2 | GSM398277 | Moroc9-75_1d_rep2 | GSE15970 | Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes | |
| 3.8 | 95.7 | GSM238408 | Pericarp 4DAF; seed development; Rep 1 | GSE9365 | Expression data from barley maturing and germinating grains | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.86 | 96.4 | Os03g0811100 | At1g08520 | - | Magnesium-chelatase subunit chlD, chloroplastprecursor (EC 6.6.1.1) (Mg-protoporphyrin IX chelatase)(Mg-chelatase subunit D) | 1e-25 | At1g08520 | CHLD | O.I. | H.G. | S.X. | |
| 0.67 | 87.2 | Os05g0103200 | At1g08520 | - | Peptidyl-prolyl cis-trans isomerase TLP20,chloroplast precursor (EC 5.2.1.8) (PPIase) (Rotamase)(Thylakoid lumen PPIase of 20 kDa) | 2e-28 | At5g13120 | peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein | O.I. | H.G. | S.X. | |
| 0.67 | 87.2 | Os03g0121700 | At1g08520 | - | - | 2e-6 | At3g49470 | NACA2 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 2) | O.I. | H.G. | S.X. | |
| 0.67 | 87.2 | Os02g0537700 | At1g08520 | - | 2-cys peroxiredoxin BAS1, chloroplast precursor(Thiol-specific antioxidant protein) (Fragment) | 2e-71 | At3g11630 | 2-cys peroxiredoxin, chloroplast (BAS1) | O.I. | H.G. | S.X. | |
| 0.60 | 79.7 | Os06g0332800 | At1g08520 | - | Bundle sheath defective protein 2 | 1e-1 | At3g47650 | bundle-sheath defective protein 2 family / bsd2 family | O.I. | H.G. | S.X. | |
| 0.57 | 77.0 | Os01g0749200 | At1g08520 | - | 50S ribosomal protein L13 | 1e-20 | At1g78630 | emb1473 (embryo defective 1473) | O.I. | H.G. | S.X. | |
| 0.56 | 76.3 | Os03g0356300 | At1g08520 | - | Ribosomal protein L6 family protein | 4e-17 | At1g05190 | emb2394 (embryo defective 2394) | O.I. | H.G. | S.X. | |
| 0.55 | 73.7 | Os05g0186000 | At1g08520 | - | - | 1e+0 | At1g15220 | CCMH | O.I. | H.G. | S.X. | |
| 0.55 | 73.7 | Os03g0704000 | At1g08520 | - | 30S ribosomal protein S13, chloroplast precursor(CS13) | 1e-1 | At5g14320 | 30S ribosomal protein S13, chloroplast (CS13) | O.I. | H.G. | S.X. | |
| 0.51 | 68.7 | Os03g0178200 | At1g08520 | - | Protein of unknown function YGGT family protein | 6e-7 | At5g21920 | YGGT family protein | O.I. | H.G. | S.X. | |
| 0.51 | 68.7 | Os02g0259600 | At1g08520 | - | 50S ribosomal protein L21, chloroplast precursor(CL21) (CS-L7) | 2e-3 | At1g35680 | 50S ribosomal protein L21, chloroplast / CL21 (RPL21) | O.I. | H.G. | S.X. | |
| 0.50 | 68.0 | Os02g0822600 | At1g08520 | - | 50S ribosomal protein L9, chloroplast precursor(CL13) | 2e+0 | At3g44890 | RPL9 (RIBOSOMAL PROTEIN L9) | O.I. | H.G. | S.X. | |
| 0.47 | 62.3 | Os01g0678600 | At1g08520 | - | Ribosomal protein S20 family protein | 1e-1 | At4g30460 | glycine-rich protein | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
| Zea_mays |
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