Co-expression analysis

Gene ID Contig10520_s_at
Gene name
Homology with ArabidopsisSimilar to At4g39990: RABA4B (RAB GTPASE HOMOLOG A4B) (HF=3e-1)
Module size 6 genes
NF 0.61
%ile 83.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5066.90.97Contig10520_s_atContig10520--3e-1At4g39990RABA4B (RAB GTPASE HOMOLOG A4B)O.I.H.G.S.X.
0.8092.50.97Contig12984_atContig12984--3e-1At3g17611ATRBL14 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 14)O.I.H.G.S.X.
0.6784.70.96Contig13303_atContig13303--4e-1At4g10480nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putativeO.I.H.G.S.X.
0.5572.00.97Contig5586_atContig5586--2e-8At1g48350ribosomal protein L18 family proteinO.I.H.G.S.X.
0.5066.90.97Contig11819_s_atContig11819--3e-3At1g08320bZIP family transcription factorO.I.H.G.S.X.
0.3849.50.97Contig5159_atContig5159--1e-23At5g17440LUC7 N_terminus domain-containing proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.995.8GSM382235Root_Control1GSE15295Mercury toxicity in barley rootsLink to GEO
3.995.8GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.695.3GSM372981genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.595.1GSM372984genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
2.792.7GSM261021ABA-Control-rep1GSE10328ABA experimentLink to GEO
2.792.7GSM382237Root_Control3GSE15295Mercury toxicity in barley rootsLink to GEO
2.591.9GSM213436Barley seeds with P. aeruginosa PAO1 for 12hrGSE8618P. aeruginosa virulent factor to barleyLink to GEO
2.591.9GSM382234Root_Hg3GSE15295Mercury toxicity in barley rootsLink to GEO
2.491.4GSM261022ABA-Control-rep2GSE10328ABA experimentLink to GEO
2.491.4GSM372987genotype: 11542 - pathogen isolates: 5874 - time: 24 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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