Co-expression analysis

Gene ID Contig10423_at
Gene name
Homology with ArabidopsisSimilar to At2g35170: MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein /phosphatidylinositol-4-phosphate 5-kinase-related (HF=1e-20)
Module size 6 genes
NF 0.63
%ile 85.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6784.70.94Contig10423_atContig10423--1e-20At2g35170MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein /phosphatidylinositol-4-phosphate 5-kinase-relatedO.I.H.G.S.X.
0.8092.50.95Contig13829_atContig13829--3e-1At5g37640UBQ9O.I.H.G.S.X.
0.7388.70.95Contig25618_atContig25618--4e-1At3g43120auxin-responsive protein-relatedO.I.H.G.S.X.
0.6077.30.95Contig9960_atContig9960aluminum activated citrate transporter-4e-2At3g08040FRD3 (FERRIC REDUCTASE DEFECTIVE 3)O.I.H.G.S.X.
0.5066.90.95Contig13809_atContig13809--3e-2At2g23420NAPRT2 (NICOTINATE PHOSPHORIBOSYLTRANSFERASE 2)O.I.H.G.S.X.
0.4053.10.95Contig9244_atContig9244--3e-16At4g26750hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.697.7GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
5.497.5GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
4.696.8GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
3.194.1GSM238435Embryo 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.893.1GSM238414Endosperm 8DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.792.7GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.692.3GSM130806JA and salinity stress, biological rep2GSE5605Expression data from barley under salinity stress and JA treatmentLink to GEO
2.189.7GSM382236Root_Control2GSE15295Mercury toxicity in barley rootsLink to GEO
2.189.7GSM146366Maythorpe Root Salt, biological rep 1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
2.189.7GSM238415Endosperm 8DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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