Co-expression analysis

Gene ID	Contig10382_s_at
Gene name
Homology with Arabidopsis	Similar to At5g45190: cyclin family protein (HF=6e-38)
Module size	6 genes
NF	0.68
%ile	89.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.1	0.93	Contig10382_s_at	Contig10382	-	-	6e-38	At5g45190	cyclin family protein	O.I.	H.G.	S.X.	Please select
0.80	92.5	0.94	Contig10383_at	Contig10383	-	-	6e-4	At2g22540	SVP (SHORT VEGETATIVE PHASE)	O.I.	H.G.	S.X.	Please select
0.73	88.7	0.92	Contig10000_s_at	Contig10000	-	-	8e+0	At5g05113	unknown protein	O.I.	H.G.	S.X.	Please select
0.73	88.7	0.94	Contig10001_at	Contig10001	-	-	9e-6	At3g01410	RNase H domain-containing protein	O.I.	H.G.	S.X.	Please select
0.67	84.7	0.95	Contig10380_at	Contig10380	-	-	4e-1	At1g17880	nascent polypeptide-associated complex (NAC) domain-containing protein / BTF3b-like transcription factor, putative	O.I.	H.G.	S.X.	Please select
0.36	47.1	0.89	Contig7156_at	Contig7156	-	-	3e+0	At1g11470	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.2	97.4	GSM261066	Xantha s-46 Hardened rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.2	97.4	GSM261065	Xantha s-46 Hardened rep1	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.5	96.7	GSM261078	Albina e-16 Hardened rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.3	96.4	GSM419979	Awn_Rep2	GSE16754	Comparative transcriptional profiling of organs of the barley spike
4.3	96.4	GSM440970	Control awn_Rep2	GSE17669	Gene expression in the barley spike during drought stress
4.0	96.0	GSM261027	ABA-Late-rep1	GSE10328	ABA experiment
3.9	95.8	GSM261028	ABA-Late-rep2	GSE10328	ABA experiment
3.8	95.7	GSM419976	Palea_Rep2	GSE16754	Comparative transcriptional profiling of organs of the barley spike
3.8	95.7	GSM440964	Control palea_Rep2	GSE17669	Gene expression in the barley spike during drought stress
3.6	95.3	GSM160823	19% SWC rep1	GSE6990	Barley drought stress

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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