Co-expression analysis

Gene ID Contig10380_x_at
Gene name
Homology with ArabidopsisSimilar to At1g17880: nascent polypeptide-associated complex (NAC) domain-containing protein / BTF3b-like transcription factor, putative (HF=4e-1)
Module size 6 genes
NF 0.74
%ile 93.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.10.99Contig10380_x_atContig10380--4e-1At1g17880nascent polypeptide-associated complex (NAC) domain-containing protein / BTF3b-like transcription factor, putativeO.I.H.G.S.X.
0.7187.10.98HA03D07u_s_atHA03D07u--1e-1At5g15530BCCP2 (BIOTIN CARBOXYL CARRIER PROTEIN 2)O.I.H.G.S.X.
0.6784.70.98HI05M04r_s_atHI05M04r--1e-23At2g3337060S ribosomal protein L23 (RPL23B)O.I.H.G.S.X.
0.6077.30.98Contig11081_atContig11081--1e-26At5g47640NF-YB2 (NUCLEAR FACTOR Y, SUBUNIT B2)O.I.H.G.S.X.
0.6077.30.99HU14M19u_s_atHU14M19u--3e+0At1g7406060S ribosomal protein L6 (RPL6B)O.I.H.G.S.X.
0.4458.90.99Contig19387_atContig19387--2e-1At3g30580unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.398.8GSM398253Martin_1d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
7.798.6GSM398263HS41-1_0d_rep3GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
5.897.8GSM382232Root_Hg1GSE15295Mercury toxicity in barley rootsLink to GEO
5.897.8GSM382237Root_Control3GSE15295Mercury toxicity in barley rootsLink to GEO
5.897.8GSM71146OWB-D unstress replicate 2GSE3170 Barley single feature polymorphisms and drought stress gene expressionLink to GEO
5.797.7GSM382236Root_Control2GSE15295Mercury toxicity in barley rootsLink to GEO
4.796.9GSM398261HS41-1_0d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
3.895.7GSM431546pathogen isolates: Mock - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
3.695.3GSM382234Root_Hg3GSE15295Mercury toxicity in barley rootsLink to GEO
3.595.1GSM382235Root_Control1GSE15295Mercury toxicity in barley rootsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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