Co-expression analysis

Gene ID Contig10380_at
Gene name
Homology with ArabidopsisSimilar to At1g17880: nascent polypeptide-associated complex (NAC) domain-containing protein / BTF3b-like transcription factor, putative (HF=4e-1)
Module size 6 genes
NF 0.76
%ile 95.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.10.94Contig10380_atContig10380--4e-1At1g17880nascent polypeptide-associated complex (NAC) domain-containing protein / BTF3b-like transcription factor, putativeO.I.H.G.S.X.
0.7187.10.91Contig19674_atContig19674--9e-2At3g25600calcium ion bindingO.I.H.G.S.X.
0.7187.10.92Contig10001_atContig10001--9e-6At3g01410RNase H domain-containing proteinO.I.H.G.S.X.
0.6784.70.94Contig10383_atContig10383--6e-4At2g22540SVP (SHORT VEGETATIVE PHASE)O.I.H.G.S.X.
0.6380.30.91Contig20672_x_atContig20672--5e+0At5g54430universal stress protein (USP) family proteinO.I.H.G.S.X.
0.6178.70.92Contig10382_s_atContig10382--6e-38At5g45190cyclin family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.399.6GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
11.499.3GSM238411Pericarp 8DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.496.6GSM419979Awn_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spikeLink to GEO
4.496.6GSM440970Control awn_Rep2GSE17669Gene expression in the barley spike during drought stressLink to GEO
4.096.0GSM261028ABA-Late-rep2GSE10328ABA experimentLink to GEO
4.096.0GSM261027ABA-Late-rep1GSE10328ABA experimentLink to GEO
3.695.3GSM419976Palea_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spikeLink to GEO
3.695.3GSM440964Control palea_Rep2GSE17669Gene expression in the barley spike during drought stressLink to GEO
3.595.1GSM16081938% SWC rep1GSE6990Barley drought stressLink to GEO
3.494.8GSM160464drought control rep1GSE6990Barley drought stressLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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