Co-expression analysis

Gene ID	Contig10373_at
Gene name
Homology with Arabidopsis	Similar to At2g23580: MES4 (METHYL ESTERASE 4) (HF=1e-4)
Module size	7 genes
NF	0.04
%ile	5.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.80	92.5	0.88	Contig10373_at	Contig10373	-	-	1e-4	At2g23580	MES4 (METHYL ESTERASE 4)	O.I.	H.G.	S.X.	Please select
0.15	14.1	0.89	Contig3743_at	Contig3743	-	-	8e-4	At1g19180	JAZ1 (JASMONATE-ZIM-DOMAIN PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.08	6.5	0.91	EBma03_SQ002_J20_x_at	EBma03_SQ002_J20	-	-	3e+0	At3g09250	DNA binding / nuclease	O.I.	H.G.	S.X.	Please select
0.04	3.4	0.93	HF04I11r_s_at	HF04I11r	-	-	9e-1	At3g20340	-	O.I.	H.G.	S.X.	Please select
0.02	1.8	0.89	Contig10463_at	Contig10463	-	-	4e-1	At5g28690	unknown protein	O.I.	H.G.	S.X.	Please select
0.02	1.8	0.93	HX03D08u_at	HX03D08u	-	-	6e-1	At1g04960	-	O.I.	H.G.	S.X.	Please select
0.01	1.1	0.93	Contig7733_at	Contig7733	-	-	3e-9	At5g22300	NIT4 (NITRILASE 4)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
24.1	99.8	GSM238408	Pericarp 4DAF; seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
23.0	99.8	GSM238410	Pericarp 8DAF; seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
20.3	99.7	GSM238411	Pericarp 8DAF; seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
15.3	99.6	GSM238409	Pericarp 4DAF; seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
11.7	99.3	GSM238428	Embryo 16DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
7.9	98.7	GSM238429	Embryo 16DAF; Seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
4.4	96.6	GSM238438	Embryo 72 h; Seed germination; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
3.0	93.8	GSM238412	Endosperm 4DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
3.0	93.8	GSM238439	Embryo 72 h; Seed germination; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
2.9	93.4	GSM146357	Golden Promise Root Control, biological rep1	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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