Co-expression analysis

Gene ID Contig10265_at
Gene name
Homology with ArabidopsisSimilar to At5g24340: 3'-5' exonuclease domain-containing protein (HF=2e-7)
Module size 6 genes
NF 0.67
%ile 88.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.10.95Contig10265_atContig10265--2e-7At5g243403'-5' exonuclease domain-containing proteinO.I.H.G.S.X.
0.6784.70.95Contig24660_atContig24660--6e+0Atmg00680-O.I.H.G.S.X.
0.6784.70.96Contig177_atContig177--3e-93At5g17310UTP--glucose-1-phosphate uridylyltransferase, putative / UDP-glucose pyrophosphorylase, putative / UGPase, putativeO.I.H.G.S.X.
0.6077.30.96Contig16518_atContig16518--7e+0Atmg00070-O.I.H.G.S.X.
0.4053.10.96Contig15422_atContig15422--2e-1At3g10585myb family transcription factor / I-box binding factor-related proteinO.I.H.G.S.X.
0.3647.10.95Contig19125_atContig19125--4e-3At2g33980atnudt22 (Arabidopsis thaliana Nudix hydrolase homolog 22)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.698.2GSM372992genotype: 11542 - pathogen isolates: K1 - time: 0 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
5.597.6GSM238433Embryo 0 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
5.497.5GSM419977Palea_Rep3GSE16754Comparative transcriptional profiling of organs of the barley spikeLink to GEO
5.497.5GSM440965Control palea_Rep3GSE17669Gene expression in the barley spike during drought stressLink to GEO
4.997.1GSM419975Palea_Rep1GSE16754Comparative transcriptional profiling of organs of the barley spikeLink to GEO
4.997.1GSM440963Control palea_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
4.897.0GSM419976Palea_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spikeLink to GEO
4.897.0GSM440964Control palea_Rep2GSE17669Gene expression in the barley spike during drought stressLink to GEO
4.897.0GSM440966Stressed palea_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
4.796.9GSM238432Embryo 0 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage