Co-expression analysis

Gene ID	Contig10144_s_at
Gene name
Homology with Arabidopsis	Similar to At1g52510: hydrolase, alpha/beta fold family protein (HF=1e-13)
Module size	6 genes
NF	0.10
%ile	13.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.83	94.0	0.84	Contig10144_s_at	Contig10144	-	-	1e-13	At1g52510	hydrolase, alpha/beta fold family protein	O.I.	H.G.	S.X.	Please select
0.38	49.5	0.84	Contig4782_s_at	Contig4782	-	-	4e-1	At5g11950	protein homodimerization	O.I.	H.G.	S.X.	Please select
0.18	18.2	0.90	Contig7474_s_at	Contig7474	-	-	6e+0	At5g40650	SDH2-2	O.I.	H.G.	S.X.	Please select
0.07	5.8	0.93	Contig16331_at	Contig16331	-	-	9e+0	Atmg01310	-	O.I.	H.G.	S.X.	Please select
0.04	3.4	0.90	Contig10978_at	Contig10978	-	-	5e-14	At1g13270	MAP1C (METHIONINE AMINOPEPTIDASE 1B)	O.I.	H.G.	S.X.	Please select
0.04	3.4	0.92	Contig4783_at	Contig4783	-	-	8e-20	At3g22960	PKP-ALPHA	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.7	95.5	GSM398258	Martin_5d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
3.2	94.3	GSM398282	Moroc9-75_5d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
3.2	94.3	GSM398281	Moroc9-75_5d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
3.1	94.1	GSM238410	Pericarp 8DAF; seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
3.0	93.8	GSM398260	Martin_5d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
2.9	93.4	GSM398275	Moroc9-75_0d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
2.7	92.7	GSM398276	Moroc9-75_1d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
2.6	92.3	GSM146375	Maythorpe shoot Control, biological rep1	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
2.6	92.3	GSM71148	OWB-R unstress replicate 1	GSE3170	Barley single feature polymorphisms and drought stress gene expression
2.5	91.9	GSM130803	JA, biological rep1	GSE5605	Expression data from barley under salinity stress and JA treatment

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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