Co-expression analysis

Gene ID Contig10126_at
Gene name
Homology with ArabidopsisSimilar to At4g30067: LCR63 (Low-molecular-weight cysteine-rich 63) (HF=9e-2)
Module size 6 genes
NF 0.28
%ile 36.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5674.30.91Contig10126_atContig10126--9e-2At4g30067LCR63 (Low-molecular-weight cysteine-rich 63)O.I.H.G.S.X.
0.5572.00.90Contig13915_atContig13915--7e-2At5g13850NACA3 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 3)O.I.H.G.S.X.
0.4458.90.93Contig13577_atContig13577--2e+0At5g65650unknown proteinO.I.H.G.S.X.
0.4053.10.94Contig7548_atContig7548--5e-35At2g19830SNF7.2O.I.H.G.S.X.
0.2224.20.91HVSMEh0085P21r2_x_atHVSMEh0085P21r2--1e+1At4g35263unknown proteinO.I.H.G.S.X.
0.1210.40.91Contig8041_atContig8041--9e-2At4g28480DNAJ heat shock family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.396.4GSM261073Albina f-17 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.995.8GSM1611487% SWC rep3GSE6990Barley drought stressLink to GEO
3.494.8GSM213443Barley seeds with P. aeruginosa PA5021 mutant for 12hrGSE8618P. aeruginosa virulent factor to barleyLink to GEO
3.294.3GSM213441Barley seeds control in Hoagland solution for 12hrGSE8618P. aeruginosa virulent factor to barleyLink to GEO
3.194.1GSM261038Dicktoo-subzero-rep3GSE10329Low temperature stress in cv. DicktooLink to GEO
3.093.8GSM213436Barley seeds with P. aeruginosa PAO1 for 12hrGSE8618P. aeruginosa virulent factor to barleyLink to GEO
3.093.8GSM238414Endosperm 8DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.993.4GSM1608317% SWC rep1GSE6990Barley drought stressLink to GEO
2.792.7GSM261036Dicktoo-subzero-rep1GSE10329Low temperature stress in cv. DicktooLink to GEO
2.692.3GSM238435Embryo 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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