Co-expression analysis

Gene ID	Contig10064_at
Gene name
Homology with Arabidopsis	Similar to At2g12465: LCR50 (Low-molecular-weight cysteine-rich 50) (HF=2e+0)
Module size	6 genes
NF	0.65
%ile	86.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.59	75.8	0.96	Contig10064_at	Contig10064	-	-	2e+0	At2g12465	LCR50 (Low-molecular-weight cysteine-rich 50)	O.I.	H.G.	S.X.	Please select
0.80	92.5	0.97	Contig7067_at	Contig7067	-	-	2e-14	At3g04240	SEC (secret agent)	O.I.	H.G.	S.X.	Please select
0.67	84.7	0.97	Contig13002_at	Contig13002	-	-	2e-10	At1g45150	unknown protein	O.I.	H.G.	S.X.	Please select
0.60	77.3	0.96	HA11D16u_s_at	HA11D16u	-	-	2e+0	At1g08520	CHLD	O.I.	H.G.	S.X.	Please select
0.50	66.9	0.96	Contig7648_at	Contig7648	-	-	6e-1	At1g12250	thylakoid lumenal protein-related	O.I.	H.G.	S.X.	Please select
0.40	53.1	0.97	Contig8146_at	Contig8146	-	-	6e-30	At1g79830	GC5 (golgin candidate 5)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.1	98.0	GSM282031	Malting_day1_Harrington_rep1	GSE11200	Expression data from malting barley seeds
5.6	97.7	GSM440968	Stressed palea_Rep3	GSE17669	Gene expression in the barley spike during drought stress
5.0	97.2	GSM238436	Embryo 48 h; Seed germination; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
4.5	96.7	GSM238428	Embryo 16DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
4.3	96.4	GSM440967	Stressed palea_Rep2	GSE17669	Gene expression in the barley spike during drought stress
3.9	95.8	GSM282033	Malting_day4_Harrington_rep4	GSE11200	Expression data from malting barley seeds
3.8	95.7	GSM440966	Stressed palea_Rep1	GSE17669	Gene expression in the barley spike during drought stress
3.8	95.7	GSM440962	Stressed lemma_Rep3	GSE17669	Gene expression in the barley spike during drought stress
3.7	95.5	GSM238438	Embryo 72 h; Seed germination; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
3.7	95.5	GSM440961	Stressed lemma_Rep2	GSE17669	Gene expression in the barley spike during drought stress

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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