Co-expression analysis

Gene ID	Contig10043_at
Gene name
Homology with Arabidopsis	Similar to At5g13280: AK-LYS1 (ASPARTATE KINASE 1) (HF=8e-38)
Module size	6 genes
NF	0.29
%ile	38.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	84.7	0.96	Contig10043_at	Contig10043	-	-	8e-38	At5g13280	AK-LYS1 (ASPARTATE KINASE 1)	O.I.	H.G.	S.X.	Please select
0.46	61.0	0.96	Contig22791_at	Contig22791	-	-	6e-4	At3g01650	RGLG1 (RING domain Ligase1)	O.I.	H.G.	S.X.	Please select
0.44	58.9	0.96	Contig10812_at	Contig10812	-	-	2e+0	At1g54410	dehydrin family protein	O.I.	H.G.	S.X.	Please select
0.33	42.6	0.96	Contig9520_at	Contig9520	-	-	4e-4	At5g46160	ribosomal protein L14 family protein / huellenlos paralog (HLP)	O.I.	H.G.	S.X.	Please select
0.23	26.1	0.96	HVSMEc0019C19f_at	HVSMEc0019C19f	-	-	0	Atcg00020	-	O.I.	H.G.	S.X.	Please select
0.13	11.6	0.96	Contig5117_at	Contig5117	-	-	8e-2	At5g60500	undecaprenyl pyrophosphate synthetase family protein / UPP synthetase family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
11.3	99.3	GSM261073	Albina f-17 Hardened rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
11.0	99.2	GSM261064	Xantha s-46 Control rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
8.9	98.9	GSM261067	Xantha s-46 Hardened rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
8.5	98.8	GSM261070	Albina f-17 Control rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.0	97.2	GSM261063	Xantha s-46 Control rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.1	96.2	GSM398263	HS41-1_0d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
3.8	95.7	GSM261069	Albina f-17 Control rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.6	95.3	GSM261072	Albina f-17 Hardened rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.6	95.3	GSM261079	Albina e-16 Hardened rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.5	95.1	GSM261074	Albina e-16 Control rep1	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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