Co-expression analysis

Gene ID At5g66310
Gene name kinesin motor family protein
Module size 5 genes
NF 0.17
%ile 14.5



Co-expression network

pink confeito: Transcription factor, green bicone: Binding protein, red cone: Enzyme protein, blue sphere: Other protein
large node: VF over 0.50, middle node: over 0.25, small node: below 0.25



Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func. O.I. H.G. S.X. Other DB
1.00100.01.00At5g66310836763kinesin motor family proteinF:microtubule motor activity, ATP binding;P:microtubule-based movement;C:microtubule associated complex;MOFPBVAO.I.H.G.S.X.
0.4050.80.74At1g10120837549DNA binding / transcription factorF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFOBO.I.H.G.S.X.
0.3338.10.74At5g15580831411LNG1 (LONGIFOLIA1)Encodes LONGIFOLIA1 (LNG1). Regulates leaf morphology by promoting cell expansion in the leaf-length direction. The LNG1 homologue LNG2 (At3g02170) has similar function.O.I.H.G.S.X.
0.2726.20.75At1g26960839587AtHB23 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 23)Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.O.I.H.G.S.X.
0.030.60.74At3g56760824843calcium-dependent protein kinase, putative / CDPK, putativeF:in 6 functions;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:plasma membrane, membrane;MOPFBVAO.I.H.G.S.X.

Click More genes

Link to AtGenExpress Visualization Tool



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
60.199.8E-ATMX-35-raw-cel-1574334864
39.099.8E-ATMX-35-raw-cel-1574334880
31.599.7E-MEXP-1138-raw-cel-1432773194
31.299.7E-MEXP-1138-raw-cel-1432772970
29.299.7E-MEXP-285-raw-cel-440782791
26.999.7E-ATMX-35-raw-cel-1574334848
25.999.7E-MEXP-1138-raw-cel-1432772842
25.699.7E-MEXP-1138-raw-cel-1432773002
25.299.6E-MEXP-1138-raw-cel-1432772682
25.299.6E-MEXP-285-raw-cel-440782725
24.999.6GSM154508Arabidopsis growing pollen tubes rep2GSE6696Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in ArabidopsisLink to GEO
24.899.6E-MEXP-1138-raw-cel-1432772874
24.399.6E-MEXP-1138-raw-cel-1432773098
24.299.6GSM154506Arabidopsis hydrated pollen grains rep2GSE6696Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in ArabidopsisLink to GEO
24.299.6E-MEXP-1138-raw-cel-1432772554
23.499.6E-MEXP-1138-raw-cel-1432773130
23.499.6E-MEXP-1138-raw-cel-1432772522
23.399.6E-MEXP-1138-raw-cel-1432772938
23.199.6GSM131638ATGE_73_CGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
22.799.6E-MEXP-1138-raw-cel-1432772586
22.499.6GSM131637ATGE_73_BGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
21.699.6GSM131636ATGE_73_AGSE5632AtGenExpress: Developmental series (flowers and pollen)Link to GEO
21.399.6E-MEXP-1138-raw-cel-1432773162
21.099.6E-MEXP-1138-raw-cel-1432772650
20.699.6E-MEXP-1138-raw-cel-1432772618
20.399.6E-MEXP-1138-raw-cel-1432773226
19.699.6E-MEXP-1138-raw-cel-1432772714
19.699.6GSM239251Columbia glabrous (C24) wild type pollenGSE9408Identification of putative Arabidopsis DEMETER target genes by GeneChip AnalysisLink to GEO
19.699.6E-MEXP-1138-raw-cel-1432773354
19.299.6E-MEXP-1138-raw-cel-1432772906
18.799.5GSM154504Arabidopsis desiccated mature pollen grains rep2GSE6696Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in ArabidopsisLink to GEO
18.699.5E-MEXP-1138-raw-cel-1432772746
18.699.5E-MEXP-1138-raw-cel-1432772778
18.299.5GSM239253CaMV::DME pollenGSE9408Identification of putative Arabidopsis DEMETER target genes by GeneChip AnalysisLink to GEO
17.499.5E-MEXP-1138-raw-cel-1432773386
17.399.5E-MEXP-1138-raw-cel-1432772810
16.899.5GSM142740DH001_ATH1_A7-MPG1GSE6162Transcriptome analysis of Arabidopsis microgametogenesisLink to GEO
16.499.5GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
14.899.4E-MEXP-1138-raw-cel-1432773034
13.599.4E-MEXP-1138-raw-cel-1432773066
13.399.4GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
12.199.3GSM133762Lindsey_1-14_torpedo-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissuesLink to GEO
11.099.2GSM239252Columbia glabrous (C24) wild type stamenGSE9408Identification of putative Arabidopsis DEMETER target genes by GeneChip AnalysisLink to GEO
11.099.2GSM239254CaMV::DME stamenGSE9408Identification of putative Arabidopsis DEMETER target genes by GeneChip AnalysisLink to GEO
11.099.2GSM154505Arabidopsis hydrated pollen grains rep1GSE6696Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in ArabidopsisLink to GEO
10.799.2GSM154507Arabidopsis growing pollen tubes rep1GSE6696Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in ArabidopsisLink to GEO
10.199.2E-MEXP-1138-raw-cel-1432773322
10.099.2GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
9.999.1GSM184497Endodermis&Pericycle root cells 2hr transitory KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
9.799.1GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
9.499.1GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
9.199.1GSM290758root - 01% oxygen - 48h - AGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plantsLink to GEO
8.899.0E-MEXP-1138-raw-cel-1432773290
8.699.0E-NASC-78-raw-cel-1463195171

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0361GO:0007018Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins.Link to AmiGO
0.0211GO:0009739A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gibberellin stimulus.Link to AmiGO

KEGG PATHWAY inferred to related to the module

SFGenesKEGG IDPathway nameLink to KEGG

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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