VF %ile CC Gene ID Repr. ID Gene name Func. O.I. H.G. S.X. Other DB 0.23 19.3 1.00 At5g61650 836287 CYCP4 The P-type cyclins (CYCPs) share a conserved central region of 100 amino acids ('cyclin box') displaying homology to the corresponding region of the PHO80 cyclin from Saccharomyces cerevisiae and the related G1 cyclins from Trypanosoma cruzi and T. brucei. O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) 0.57 73.8 0.83 At2g20520 816574 FLA6 (FASCICLIN-LIKE ARABINOGALACTAN 6) fasciclin-like arabinogalactan-protein 6 (Fla6) O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) 0.50 65.3 0.79 At1g54970 841938 ATPRP1 (PROLINE-RICH PROTEIN 1) encodes a proline-rich protein that is specifically expressed in the root. O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) 0.50 65.3 0.79 At5g57540 835858 xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative F:hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process, cellular glucan metabolic process;C:endomembrane system, apoplast, cell wall;PFBO O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) 0.40 50.8 0.83 At2g25240 817062 serine-type endopeptidase inhibitor F:serine-type endopeptidase inhibitor activity;P:biological_process unknown;C:cellular_component unknown;MVBPOAF O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report)
Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO 235.2 100.0 GSM205426 met1-3_leaf_second-selfed generation_rep02 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation 220.7 100.0 GSM205430 met1-3_leaf_fourth-selfed generation_rep02 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation 180.1 100.0 GSM205428 met1-3_leaf_fourth-selfed generation_rep01 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation 139.7 99.9 GSM205364 met1-3_leaf_second-selfed generation_rep01 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation 71.9 99.9 GSM205435 Col_ leaf_ wildtype_rep02 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation 64.3 99.8 GSM131305 AtGen_6-2621_Osmoticstress-Roots-24.0h_Rep1 GSE5622 AtGenExpress: Stress Treatments (Osmotic stress) 53.6 99.8 GSM205432 Col_ leaf_ wildtype_rep01 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation 45.4 99.8 GSM131326 AtGen_6-3522_Saltstress-Roots-12.0h_Rep2 GSE5623 AtGenExpress: Stress Treatments (Salt stress) 41.3 99.8 E-ATMX-1-raw-cel-1112746154 39.1 99.8 GSM253648 Col-0-1 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1 38.6 99.8 GSM133961 Fukuda_1-6_4B_Rep2_ATH1 GSE5748 In vitro tracheary element transdifferentiation of Col-0 suspension cells. 37.1 99.7 GSM253645 High_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1 36.2 99.7 GSM131698 ATGE_81_B GSE5634 AtGenExpress: Developmental series (siliques and seeds) 35.9 99.7 GSM131302 AtGen_6-2522_Osmoticstress-Roots-12.0h_Rep2 GSE5622 AtGenExpress: Stress Treatments (Osmotic stress) 35.9 99.7 GSM131697 ATGE_81_A GSE5634 AtGenExpress: Developmental series (siliques and seeds) 35.6 99.7 GSM253647 Col-0 3 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1 34.7 99.7 GSM131608 ATGE_42_D GSE5632 AtGenExpress: Developmental series (flowers and pollen) 34.1 99.7 GSM131699 ATGE_81_C GSE5634 AtGenExpress: Developmental series (siliques and seeds) 30.7 99.7 GSM131691 ATGE_78_D GSE5634 AtGenExpress: Developmental series (siliques and seeds) 30.3 99.7 GSM143307 Low_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 30.2 99.7 GSM253649 Col-0-2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1 29.2 99.7 GSM131695 ATGE_79_B GSE5634 AtGenExpress: Developmental series (siliques and seeds) 28.9 99.7 GSM143299 High_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 26.6 99.7 GSM131696 ATGE_79_C GSE5634 AtGenExpress: Developmental series (siliques and seeds) 26.3 99.7 GSM133960 Fukuda_1-5_4A_Rep1_ATH1 GSE5748 In vitro tracheary element transdifferentiation of Col-0 suspension cells. 26.1 99.7 GSM131694 ATGE_79_A GSE5634 AtGenExpress: Developmental series (siliques and seeds) 25.9 99.7 GSM131693 ATGE_78_F GSE5634 AtGenExpress: Developmental series (siliques and seeds) 25.7 99.7 GSM131606 ATGE_42_B GSE5632 AtGenExpress: Developmental series (flowers and pollen) 24.5 99.6 GSM143298 Low_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 24.0 99.6 GSM131692 ATGE_78_E GSE5634 AtGenExpress: Developmental series (siliques and seeds) 22.2 99.6 GSM284387 Arabidopsis GSUS4b GSE11262 Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage. 21.9 99.6 E-ATMX-1-raw-cel-1112746267 21.4 99.6 GSM131607 ATGE_42_C GSE5632 AtGenExpress: Developmental series (flowers and pollen) 21.1 99.6 GSM143306 High_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 20.9 99.6 E-MEXP-1797-raw-cel-1669767958 20.8 99.6 GSM131306 AtGen_6-2622_Osmoticstress-Roots-24.0h_Rep2 GSE5622 AtGenExpress: Stress Treatments (Osmotic stress) 20.8 99.6 GSM142904 WW002_ATH1_A1-willa-CON-REP2 GSE6181 Assembly of the cell wall pectic matrix. 20.3 99.6 GSM253646 Low_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1 19.8 99.6 E-ATMX-31-raw-cel-1516947882 19.8 99.6 E-ATMX-1-raw-cel-1112746209 19.5 99.6 E-MEXP-1797-raw-cel-1669768048 18.9 99.5 E-MEXP-1797-raw-cel-1669767976 18.7 99.5 E-ATMX-31-raw-cel-1516947899 18.0 99.5 E-MEXP-1797-raw-cel-1669767994 18.0 99.5 E-MEXP-1797-raw-cel-1669767967 17.8 99.5 GSM131301 AtGen_6-2521_Osmoticstress-Roots-12.0h_Rep1 GSE5622 AtGenExpress: Stress Treatments (Osmotic stress) 17.8 99.5 GSM133966 Fukuda_1-11_10A_Rep1_ATH1 GSE5748 In vitro tracheary element transdifferentiation of Col-0 suspension cells. 17.6 99.5 GSM284386 Arabidopsis GSUS3 GSE11262 Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage. 17.2 99.5 E-MEXP-1797-raw-cel-1669767940 16.6 99.5 E-ATMX-31-raw-cel-1516947916 16.3 99.5 GSM143308 Tsu_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 16.1 99.5 GSM143300 Ts_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 16.1 99.5 GSM133965 Fukuda_1-10_8B_Rep2_ATH1 GSE5748 In vitro tracheary element transdifferentiation of Col-0 suspension cells. 15.9 99.5 E-MEXP-1797-raw-cel-1669768012 15.7 99.5 GSM311290 Laser capture microdissected (LCM) cellularized endosperm at the linear-cotyledon stage, biological replicate 2 GSE12403 Expression data from Arabidopsis seed compartments at the linear-cotyledon stage 15.7 99.5 E-MEXP-1797-raw-cel-1669768066 15.6 99.5 GSM143301 Ts_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 15.5 99.5 GSM10482 lec1-1 Mature Green Seed 2 GSE1051 Seed development in LEAFY COTYLEDON1 mutants 15.4 99.5 GSM143310 Tsu_genomic_hyb_1 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 15.3 99.4 E-MEXP-1797-raw-cel-1669768030 15.2 99.4 GSM133967 Fukuda_1-12_10B_Rep2_ATH1 GSE5748 In vitro tracheary element transdifferentiation of Col-0 suspension cells. 14.6 99.4 E-MEXP-1797-raw-cel-1669768084 14.5 99.4 E-MEXP-1797-raw-cel-1669768075 14.5 99.4 E-MEXP-1797-raw-cel-1669767949 14.4 99.4 E-MEXP-1797-raw-cel-1669768021 14.4 99.4 E-MEXP-1797-raw-cel-1669768003 14.3 99.4 GSM143309 Tsu_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 14.2 99.4 E-MEXP-1797-raw-cel-1669768057 14.2 99.4 GSM131689 ATGE_77_E GSE5634 AtGenExpress: Developmental series (siliques and seeds) 14.0 99.4 GSM133964 Fukuda_1-9_8A_Rep1_ATH1 GSE5748 In vitro tracheary element transdifferentiation of Col-0 suspension cells. 13.8 99.4 E-MEXP-1797-raw-cel-1669767985 13.8 99.4 GSM134208 Murray_3-4_D7-GROWTH_Rep1_ATH1 GSE5750 Growth of suspension-cultured cells 13.7 99.4 GSM143302 Ts_genomic_hyb_1 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 13.6 99.4 GSM133813 Diamond_A-2-Diamo-met_SLD GSE5735 Identification of Core Genes Regulating Plant Programmed Cell Death (PCD) 13.0 99.4 GSM131690 ATGE_77_F GSE5634 AtGenExpress: Developmental series (siliques and seeds) 12.9 99.3 GSM134204 Murray_3-2_D3-GROWTH_Rep1_ATH1 GSE5750 Growth of suspension-cultured cells 12.9 99.3 GSM142902 WW001_ATH1_A1-WILLA-CON GSE6181 Assembly of the cell wall pectic matrix. 12.8 99.3 GSM253650 Ler 3 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1 12.7 99.3 GSM10481 lec1-1 Mature Green Seed 1 GSE1051 Seed development in LEAFY COTYLEDON1 mutants 12.3 99.3 GSM253652 Ler 2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1 12.1 99.3 GSM133814 Diamond_A-3-Diamo-met_SLD GSE5735 Identification of Core Genes Regulating Plant Programmed Cell Death (PCD) 12.1 99.3 GSM133809 Diamond_A-2-Diamo-fum_SLD GSE5735 Identification of Core Genes Regulating Plant Programmed Cell Death (PCD) 12.0 99.3 GSM133963 Fukuda_1-8_6B_Rep2_ATH1 GSE5748 In vitro tracheary element transdifferentiation of Col-0 suspension cells. 11.9 99.3 GSM133810 Diamond_A-3-Diamo-fum_SLD GSE5735 Identification of Core Genes Regulating Plant Programmed Cell Death (PCD) 11.8 99.3 GSM133962 Fukuda_1-7_6A_Rep1_ATH1 GSE5748 In vitro tracheary element transdifferentiation of Col-0 suspension cells. 11.8 99.3 E-MEXP-1797-raw-cel-1669768039 11.6 99.3 GSM133811 Diamond_A-4-Diamo-fum_SLD GSE5735 Identification of Core Genes Regulating Plant Programmed Cell Death (PCD) 11.5 99.3 GSM253651 Ler 1 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1 11.5 99.3 GSM133815 Diamond_A-4-Diamo-met_SLD GSE5735 Identification of Core Genes Regulating Plant Programmed Cell Death (PCD) 11.4 99.3 GSM133808 Diamond_A-1-Diamo-fum_SLD GSE5735 Identification of Core Genes Regulating Plant Programmed Cell Death (PCD) 11.3 99.3 GSM133945 Murray_2-1_T0-APH_Rep1_ATH1 GSE5747 Genome-wide cell cycle studies 11.2 99.2 GSM131688 ATGE_77_D GSE5634 AtGenExpress: Developmental series (siliques and seeds) 10.4 99.2 GSM62696 Columbia flowers_stage 13-14 GSE2848 Auxin Response Factor mediated flower gene expression 10.3 99.2 GSM133950 Murray_2-6_T10-APH_Rep1_ATH1 GSE5747 Genome-wide cell cycle studies 9.7 99.1 GSM142906 WW002_ATH1_A2-willa-ISOX-REP2 GSE6181 Assembly of the cell wall pectic matrix. 9.5 99.1 GSM142905 WW002_ATH1_A1-willa-CON-REP3 GSE6181 Assembly of the cell wall pectic matrix. 9.3 99.1 GSM142907 WW002_ATH1_A2-willa-ISOX-REP3 GSE6181 Assembly of the cell wall pectic matrix. 8.9 99.0 GSM133812 Diamond_A-1-Diamo-met_SLD GSE5735 Identification of Core Genes Regulating Plant Programmed Cell Death (PCD) 8.8 99.0 GSM133958 Fukuda_1-3_2A_Rep1_ATH1 GSE5748 In vitro tracheary element transdifferentiation of Col-0 suspension cells. 8.6 99.0 GSM131609 ATGE_43_A GSE5632 AtGenExpress: Developmental series (flowers and pollen) 8.6 99.0 GSM133959 Fukuda_1-4_2B_Rep2_ATH1 GSE5748 In vitro tracheary element transdifferentiation of Col-0 suspension cells.
: Transcription factor, 
: Binding protein, 
: Enzyme protein, 
: Other protein
: VF over 0.50, 
: over 0.25, 
