CoP: Co-expressed Biological Processes

Co-expression analysis

Gene ID At5g42010

Gene name WD-40 repeat family protein

Module size 5 genes

NF 0.23

%ile 23.7

Co-expression network

: Transcription factor, : Binding protein, : Enzyme protein, : Other protein
: VF over 0.50, : over 0.25, : below 0.25

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func. O.I. H.G. S.X. Other DB
0.14 6.8 1.00 At5g42010 834206 WD-40 repeat family protein F:signal transducer activity;P:signal transduction, response to salt stress;C:heterotrimeric G-protein complex;MFBOPA O.I. H.G. S.X.
0.55 70.6 0.89 At5g60250 836147 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding, nucleic acid binding;P:unknown;C:unknown;MFPOB O.I. H.G. S.X.
0.40 50.8 0.89 At5g55490 835642 GEX1 (GAMETE EXPRESSED PROTEIN 1) Encodes a transmembrane domain containing protein that is expressed in pollen germ cells. O.I. H.G. S.X.
0.33 38.1 0.90 At3g22760 821847 SOL1 CXC domain containing TSO1-like protein 1. The gene is expressed in stamens, pollen mother cells, and immature ovules. O.I. H.G. S.X.
0.29 30.3 0.89 At5g27610 832823 DNA binding / transcription factor F:transcription factor activity, DNA binding;P:biological_process unknown;C:cellular_component unknown;MOPFBV O.I. H.G. S.X.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	O.I.	H.G.	S.X.
0.14	6.8	1.00	At5g42010	834206	WD-40 repeat family protein	F:signal transducer activity;P:signal transduction, response to salt stress;C:heterotrimeric G-protein complex;MFBOPA	O.I.	H.G.	S.X.
0.55	70.6	0.89	At5g60250	836147	zinc finger (C3HC4-type RING finger) family protein	F:protein binding, zinc ion binding, nucleic acid binding;P:unknown;C:unknown;MFPOB	O.I.	H.G.	S.X.
0.40	50.8	0.89	At5g55490	835642	GEX1 (GAMETE EXPRESSED PROTEIN 1)	Encodes a transmembrane domain containing protein that is expressed in pollen germ cells.	O.I.	H.G.	S.X.
0.33	38.1	0.90	At3g22760	821847	SOL1	CXC domain containing TSO1-like protein 1. The gene is expressed in stamens, pollen mother cells, and immature ovules.	O.I.	H.G.	S.X.
0.29	30.3	0.89	At5g27610	832823	DNA binding / transcription factor	F:transcription factor activity, DNA binding;P:biological_process unknown;C:cellular_component unknown;MOPFBV	O.I.	H.G.	S.X.

Click More genes

Link to AtGenExpress Visualization Tool

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
89.7 99.9 GSM270870 Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep3 GSE10719 Response of Arabidopsis cell culture to phytoprostane A1
65.7 99.8 GSM270868 Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep2 GSE10719 Response of Arabidopsis cell culture to phytoprostane A1
60.8 99.8 GSM269815 T6 leaf-drought-rep1 GSE10670 Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
51.9 99.8 GSM269833 T8 leaf-drought-rep3 GSE10670 Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
49.1 99.8 GSM184537 Whole roots 2hr KCl control treated then frozen, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
43.2 99.8 E-MEXP-546-raw-cel-863289586
40.6 99.8 GSM184556 Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
38.4 99.8 E-MEXP-807-raw-cel-1173273252
37.9 99.8 GSM133762 Lindsey_1-14_torpedo-root_Rep1_ATH1 GSE5730 Transcriptional profiling of laser-capture micro-dissected embryonic tissues
32.6 99.7 GSM133304 RIKEN-NAKABAYASHI1B GSE5700 AtGenExpress: Effect of ABA during seed imbibition
31.3 99.7 GSM128662 Underwood_1-15_Cor-5x10e7-10h_Rep3_ATH1 GSE5520 Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
28.3 99.7 GSM133303 RIKEN-NAKABAYASHI1A GSE5700 AtGenExpress: Effect of ABA during seed imbibition
27.1 99.7 GSM269813 WT leaf-drought-rep1 GSE10670 Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
26.4 99.7 GSM133307 RIKEN-NAKABAYASHI3A GSE5700 AtGenExpress: Effect of ABA during seed imbibition
25.3 99.6 GSM133760 Lindsey_1-12_heart-stage-root_Rep3_ATH1 GSE5730 Transcriptional profiling of laser-capture micro-dissected embryonic tissues
23.2 99.6 GSM131321 AtGen_6-3421_Saltstress-Roots-6.0h_Rep1 GSE5623 AtGenExpress: Stress Treatments (Salt stress)
22.5 99.6 E-ATMX-1-raw-cel-1112746154
22.2 99.6 E-MEXP-807-raw-cel-1173273170
21.5 99.6 GSM133866 Cain_1-1_WT1_Rep1_ATH1 GSE5740 Polycomb Binding Protein
21.1 99.6 GSM131322 AtGen_6-3422_Saltstress-Roots-6.0h_Rep2 GSE5623 AtGenExpress: Stress Treatments (Salt stress)
20.9 99.6 GSM133308 RIKEN-NAKABAYASHI4A GSE5700 AtGenExpress: Effect of ABA during seed imbibition
20.3 99.6 GSM133310 RIKEN-NAKABAYASHI5B GSE5700 AtGenExpress: Effect of ABA during seed imbibition
19.7 99.6 GSM253650 Ler 3 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
19.3 99.6 GSM133306 RIKEN-NAKABAYASHI2B GSE5700 AtGenExpress: Effect of ABA during seed imbibition
18.8 99.5 GSM269831 T6 leaf-drought-rep3 GSE10670 Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
18.6 99.5 GSM253648 Col-0-1 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
18.2 99.5 E-MEXP-807-raw-cel-1173273196
18.0 99.5 GSM133868 Cain_1-2_WT1_Rep2_ATH1 GSE5740 Polycomb Binding Protein
17.8 99.5 GSM253649 Col-0-2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
17.7 99.5 GSM133309 RIKEN-NAKABAYASHI4B GSE5700 AtGenExpress: Effect of ABA during seed imbibition
17.5 99.5 GSM253652 Ler 2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
17.4 99.5 E-MEXP-807-raw-cel-1173273060
16.9 99.5 E-MEXP-807-raw-cel-1173273116
16.9 99.5 GSM176876 AWP_AL_Txed_1 GSE7334 Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress
16.8 99.5 GSM244448 Arabidopsis wild-type_6 h_ Xanthomonas inoculated_biological rep1_exp1 GSE9674 Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
16.6 99.5 E-MEXP-807-raw-cel-1173273144
16.4 99.5 GSM133305 RIKEN-NAKABAYASHI2A GSE5700 AtGenExpress: Effect of ABA during seed imbibition
16.4 99.5 GSM133869 Cain_1-4_CDB1-Knockout_Rep2_ATH1 GSE5740 Polycomb Binding Protein
16.3 99.5 GSM128710 Shirras_3-7_WildEcotype-low-soil-pH-12.5mM-CaCl2_Rep1_ATH1 GSE5523 Environmental Genomics of Calcicole-calcifuge physiology
16.0 99.5 GSM269817 T8 leaf-drought-rep1 GSE10670 Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
15.5 99.5 GSM269829 WT leaf-drought-rep3 GSE10670 Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
15.2 99.4 E-MEXP-807-raw-cel-1173273223
14.3 99.4 GSM133867 Cain_1-3_CDB1-Knockout_Rep1_ATH1 GSE5740 Polycomb Binding Protein
14.3 99.4 GSM253651 Ler 1 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
14.0 99.4 GSM133773 Lindsey_1-25_torpedo-meristem_Rep1_ATH1 GSE5730 Transcriptional profiling of laser-capture micro-dissected embryonic tissues
14.0 99.4 GSM133120 RIKEN-YAMAUCHI2B GSE5687 AtGenExpress: Different temperature treatment of seeds
13.8 99.4 GSM244455 Arabidopsis AtMYB30-ox_6 h_ Xanthomonas inoculated_biological rep1_exp1 GSE9674 Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
13.7 99.4 GSM142632 MC002_ATH1_A4.1-dubos-6kc GSE6151 The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
13.4 99.4 GSM205435 Col_ leaf_ wildtype_rep02 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
13.4 99.4 GSM128661 Underwood_1-14_Cor-5x10e7-10h_Rep2_ATH1 GSE5520 Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
13.3 99.4 GSM143309 Tsu_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
13.2 99.4 GSM269821 WT leaf-drought-rep2 GSE10670 Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
13.1 99.4 E-MEXP-807-raw-cel-1173273088
12.9 99.3 GSM253645 High_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
12.8 99.3 GSM133124 S0_24H_B GSE5688 AtGenExpress: Response to sulfate limitation
12.6 99.3 GSM184497 Endodermis&Pericycle root cells 2hr transitory KNO3 treated, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
11.8 99.3 GSM260955 A2-LLOYD-PHO_REP2 GSE10326 Transcriptome analysis of pho3
11.8 99.3 GSM269822 T6 leaf-well watered-rep2 GSE10670 Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
11.6 99.3 GSM133804 Werner_1-5_wildtype-2hr-zearalenone(c2t)_Rep1_ATH1 GSE5734 Effect of mycotoxin treatment on gene expression of wild-type and an altered sensitivity mutant
11.4 99.3 GSM253647 Col-0 3 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
11.0 99.2 GSM269825 T8 leaf-drought-rep2 GSE10670 Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
11.0 99.2 GSM264762 Tween 0.1% 2h GSE10464 Expression data from Arabidopsis thaliana (Ler) rosette leaves treated with paraquat (methyl viologen)
10.8 99.2 GSM143299 High_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
10.6 99.2 GSM269827 C2 leaf-drought-rep2 GSE10670 Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
10.6 99.2 GSM184904 Arabidopsis, root cells, protophloem, standard conditions, replicate 1 GSE7641 Expression analysis of root cell-types after treatment with salt
10.6 99.2 GSM260953 A1-LLOYD-PHO_REP1 GSE10326 Transcriptome analysis of pho3
10.5 99.2 GSM143302 Ts_genomic_hyb_1 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
10.2 99.2 GSM143300 Ts_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
10.1 99.2 GSM133317 RIKEN-LI4A GSE5701 AtGenExpress: Basic hormone treatment of seeds
10.0 99.2 GSM134299 Penfield_1-1_endosperm-control_Rep1_ATH1 GSE5751 The early post-germinative embryo and endosperm transcriptomes in Arabidopsis
10.0 99.2 E-MEXP-849-raw-cel-1181980982
9.9 99.1 GSM133319 RIKEN-LI5A GSE5701 AtGenExpress: Basic hormone treatment of seeds
9.7 99.1 GSM143298 Low_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
9.5 99.1 E-MEXP-849-raw-cel-1181981046
9.4 99.1 E-MEXP-849-raw-cel-1181981030
9.3 99.1 GSM143306 High_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
9.1 99.1 E-MEXP-849-raw-cel-1181981038
9.1 99.1 GSM311294 Laser capture microdissected (LCM) chalazal seed coat at the linear-cotyledon stage, biological replicate 2 GSE12403 Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
8.9 99.0 GSM133806 Werner_1-7_mutant-2hr-zearalenone(j2t)_Rep1_ATH1 GSE5734 Effect of mycotoxin treatment on gene expression of wild-type and an altered sensitivity mutant
8.8 99.0 GSM183515 ATR1_OE_rep1 GSE7570 ATR1_like_Clade_OE_and_miR
8.8 99.0 E-MEXP-849-raw-cel-1181981014
8.8 99.0 GSM131509 ATGE_12_C GSE5630 AtGenExpress: Developmental series (leaves)
8.7 99.0 GSM311293 Laser capture microdissected (LCM) chalazal seed coat at the linear-cotyledon stage, biological replicate 1 GSE12403 Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
8.7 99.0 GSM173624 Col-0 rep3 GSE7227 microRNA160 resistant AUXIN RESPONSE FACTOR10 (mARF10) germinating seeds
8.7 99.0 GSM176879 AWP_Control_1 GSE7334 Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress
8.7 99.0 GSM143301 Ts_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title
89.7	99.9	GSM270870	Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep3	GSE10719	Response of Arabidopsis cell culture to phytoprostane A1
65.7	99.8	GSM270868	Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep2	GSE10719	Response of Arabidopsis cell culture to phytoprostane A1
60.8	99.8	GSM269815	T6 leaf-drought-rep1	GSE10670	Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
51.9	99.8	GSM269833	T8 leaf-drought-rep3	GSE10670	Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
49.1	99.8	GSM184537	Whole roots 2hr KCl control treated then frozen, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
43.2	99.8	E-MEXP-546-raw-cel-863289586
40.6	99.8	GSM184556	Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
38.4	99.8	E-MEXP-807-raw-cel-1173273252
37.9	99.8	GSM133762	Lindsey_1-14_torpedo-root_Rep1_ATH1	GSE5730	Transcriptional profiling of laser-capture micro-dissected embryonic tissues
32.6	99.7	GSM133304	RIKEN-NAKABAYASHI1B	GSE5700	AtGenExpress: Effect of ABA during seed imbibition
31.3	99.7	GSM128662	Underwood_1-15_Cor-5x10e7-10h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
28.3	99.7	GSM133303	RIKEN-NAKABAYASHI1A	GSE5700	AtGenExpress: Effect of ABA during seed imbibition
27.1	99.7	GSM269813	WT leaf-drought-rep1	GSE10670	Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
26.4	99.7	GSM133307	RIKEN-NAKABAYASHI3A	GSE5700	AtGenExpress: Effect of ABA during seed imbibition
25.3	99.6	GSM133760	Lindsey_1-12_heart-stage-root_Rep3_ATH1	GSE5730	Transcriptional profiling of laser-capture micro-dissected embryonic tissues
23.2	99.6	GSM131321	AtGen_6-3421_Saltstress-Roots-6.0h_Rep1	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
22.5	99.6	E-ATMX-1-raw-cel-1112746154
22.2	99.6	E-MEXP-807-raw-cel-1173273170
21.5	99.6	GSM133866	Cain_1-1_WT1_Rep1_ATH1	GSE5740	Polycomb Binding Protein
21.1	99.6	GSM131322	AtGen_6-3422_Saltstress-Roots-6.0h_Rep2	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
20.9	99.6	GSM133308	RIKEN-NAKABAYASHI4A	GSE5700	AtGenExpress: Effect of ABA during seed imbibition
20.3	99.6	GSM133310	RIKEN-NAKABAYASHI5B	GSE5700	AtGenExpress: Effect of ABA during seed imbibition
19.7	99.6	GSM253650	Ler 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
19.3	99.6	GSM133306	RIKEN-NAKABAYASHI2B	GSE5700	AtGenExpress: Effect of ABA during seed imbibition
18.8	99.5	GSM269831	T6 leaf-drought-rep3	GSE10670	Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
18.6	99.5	GSM253648	Col-0-1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
18.2	99.5	E-MEXP-807-raw-cel-1173273196
18.0	99.5	GSM133868	Cain_1-2_WT1_Rep2_ATH1	GSE5740	Polycomb Binding Protein
17.8	99.5	GSM253649	Col-0-2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
17.7	99.5	GSM133309	RIKEN-NAKABAYASHI4B	GSE5700	AtGenExpress: Effect of ABA during seed imbibition
17.5	99.5	GSM253652	Ler 2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
17.4	99.5	E-MEXP-807-raw-cel-1173273060
16.9	99.5	E-MEXP-807-raw-cel-1173273116
16.9	99.5	GSM176876	AWP_AL_Txed_1	GSE7334	Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress
16.8	99.5	GSM244448	Arabidopsis wild-type_6 h_ Xanthomonas inoculated_biological rep1_exp1	GSE9674	Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
16.6	99.5	E-MEXP-807-raw-cel-1173273144
16.4	99.5	GSM133305	RIKEN-NAKABAYASHI2A	GSE5700	AtGenExpress: Effect of ABA during seed imbibition
16.4	99.5	GSM133869	Cain_1-4_CDB1-Knockout_Rep2_ATH1	GSE5740	Polycomb Binding Protein
16.3	99.5	GSM128710	Shirras_3-7_WildEcotype-low-soil-pH-12.5mM-CaCl2_Rep1_ATH1	GSE5523	Environmental Genomics of Calcicole-calcifuge physiology
16.0	99.5	GSM269817	T8 leaf-drought-rep1	GSE10670	Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
15.5	99.5	GSM269829	WT leaf-drought-rep3	GSE10670	Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
15.2	99.4	E-MEXP-807-raw-cel-1173273223
14.3	99.4	GSM133867	Cain_1-3_CDB1-Knockout_Rep1_ATH1	GSE5740	Polycomb Binding Protein
14.3	99.4	GSM253651	Ler 1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
14.0	99.4	GSM133773	Lindsey_1-25_torpedo-meristem_Rep1_ATH1	GSE5730	Transcriptional profiling of laser-capture micro-dissected embryonic tissues
14.0	99.4	GSM133120	RIKEN-YAMAUCHI2B	GSE5687	AtGenExpress: Different temperature treatment of seeds
13.8	99.4	GSM244455	Arabidopsis AtMYB30-ox_6 h_ Xanthomonas inoculated_biological rep1_exp1	GSE9674	Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
13.7	99.4	GSM142632	MC002_ATH1_A4.1-dubos-6kc	GSE6151	The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
13.4	99.4	GSM205435	Col_ leaf_ wildtype_rep02	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
13.4	99.4	GSM128661	Underwood_1-14_Cor-5x10e7-10h_Rep2_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
13.3	99.4	GSM143309	Tsu_genomic_hyb_2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
13.2	99.4	GSM269821	WT leaf-drought-rep2	GSE10670	Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
13.1	99.4	E-MEXP-807-raw-cel-1173273088
12.9	99.3	GSM253645	High_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
12.8	99.3	GSM133124	S0_24H_B	GSE5688	AtGenExpress: Response to sulfate limitation
12.6	99.3	GSM184497	Endodermis&Pericycle root cells 2hr transitory KNO3 treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
11.8	99.3	GSM260955	A2-LLOYD-PHO_REP2	GSE10326	Transcriptome analysis of pho3
11.8	99.3	GSM269822	T6 leaf-well watered-rep2	GSE10670	Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
11.6	99.3	GSM133804	Werner_1-5_wildtype-2hr-zearalenone(c2t)_Rep1_ATH1	GSE5734	Effect of mycotoxin treatment on gene expression of wild-type and an altered sensitivity mutant
11.4	99.3	GSM253647	Col-0 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
11.0	99.2	GSM269825	T8 leaf-drought-rep2	GSE10670	Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
11.0	99.2	GSM264762	Tween 0.1% 2h	GSE10464	Expression data from Arabidopsis thaliana (Ler) rosette leaves treated with paraquat (methyl viologen)
10.8	99.2	GSM143299	High_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
10.6	99.2	GSM269827	C2 leaf-drought-rep2	GSE10670	Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
10.6	99.2	GSM184904	Arabidopsis, root cells, protophloem, standard conditions, replicate 1	GSE7641	Expression analysis of root cell-types after treatment with salt
10.6	99.2	GSM260953	A1-LLOYD-PHO_REP1	GSE10326	Transcriptome analysis of pho3
10.5	99.2	GSM143302	Ts_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
10.2	99.2	GSM143300	Ts_genomic_hyb_3	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
10.1	99.2	GSM133317	RIKEN-LI4A	GSE5701	AtGenExpress: Basic hormone treatment of seeds
10.0	99.2	GSM134299	Penfield_1-1_endosperm-control_Rep1_ATH1	GSE5751	The early post-germinative embryo and endosperm transcriptomes in Arabidopsis
10.0	99.2	E-MEXP-849-raw-cel-1181980982
9.9	99.1	GSM133319	RIKEN-LI5A	GSE5701	AtGenExpress: Basic hormone treatment of seeds
9.7	99.1	GSM143298	Low_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
9.5	99.1	E-MEXP-849-raw-cel-1181981046
9.4	99.1	E-MEXP-849-raw-cel-1181981030
9.3	99.1	GSM143306	High_Na_seg_pool_tsu_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
9.1	99.1	E-MEXP-849-raw-cel-1181981038
9.1	99.1	GSM311294	Laser capture microdissected (LCM) chalazal seed coat at the linear-cotyledon stage, biological replicate 2	GSE12403	Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
8.9	99.0	GSM133806	Werner_1-7_mutant-2hr-zearalenone(j2t)_Rep1_ATH1	GSE5734	Effect of mycotoxin treatment on gene expression of wild-type and an altered sensitivity mutant
8.8	99.0	GSM183515	ATR1_OE_rep1	GSE7570	ATR1_like_Clade_OE_and_miR
8.8	99.0	E-MEXP-849-raw-cel-1181981014
8.8	99.0	GSM131509	ATGE_12_C	GSE5630	AtGenExpress: Developmental series (leaves)
8.7	99.0	GSM311293	Laser capture microdissected (LCM) chalazal seed coat at the linear-cotyledon stage, biological replicate 1	GSE12403	Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
8.7	99.0	GSM173624	Col-0 rep3	GSE7227	microRNA160 resistant AUXIN RESPONSE FACTOR10 (mARF10) germinating seeds
8.7	99.0	GSM176879	AWP_Control_1	GSE7334	Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress
8.7	99.0	GSM143301	Ts_genomic_hyb_2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1

Biological processes inferred to relate to the module

SF Genes GO ID Process Name Link to AmiGO

KEGG PATHWAY inferred to related to the module

SF Genes KEGG ID Pathway name Link to KEGG

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays

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Gene ID	At5g42010
Gene name	WD-40 repeat family protein
Module size	5 genes
NF	0.23
%ile	23.7

Co-expression analysis

Gene ID At5g42010 Gene name WD-40 repeat family protein Module size 5 genes NF 0.23 %ile 23.7

Co-expression network

: Transcription factor, : Binding protein, : Enzyme protein, : Other protein: VF over 0.50, : over 0.25, : below 0.25

Co-expressed genes

Click More genes

Link to AtGenExpress Visualization Tool

Specific experiments for the module

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

KEGG PATHWAY inferred to related to the module

SFGenesKEGG IDPathway nameLink to KEGG

Inter-species module comparison

Select a plant to compare co-expressed genes between species.Glycine_maxHordeum_vulgareOryza_sativaPopulus_trichocarpaTriticum_aestivumVitis_viniferaZea_mays

Gene ID At5g42010

Gene name WD-40 repeat family protein

Module size 5 genes

NF 0.23

%ile 23.7

: Transcription factor, : Binding protein, : Enzyme protein, : Other protein
: VF over 0.50, : over 0.25, : below 0.25

SF Genes GO ID Process Name Link to AmiGO

SF Genes KEGG ID Pathway name Link to KEGG

Select a plant to compare co-expressed genes between species.
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays