CoP: Co-expressed Biological Processes

Co-expression analysis

Gene ID At5g39630

Gene name vesicle transport v-SNARE family protein

Module size 7 genes

NF 0.40

%ile 54.9

Co-expression network

: Transcription factor, : Binding protein, : Enzyme protein, : Other protein
: VF over 0.50, : over 0.25, : below 0.25

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func. O.I. H.G. S.X. Other DB
0.63 78.1 1.00 At5g39630 833959 vesicle transport v-SNARE family protein F:SNARE binding, receptor activity;P:membrane fusion, intra-Golgi vesicle-mediated transport;C:membrane;OMFPBAV O.I. H.G. S.X.
0.50 65.3 0.85 At2g14830 815971 unknown protein F:unknown;P:biological_process unknown;C:cellular_component unknown;MPOFBV O.I. H.G. S.X.
0.50 65.3 0.84 At3g58390 825008 eukaryotic release factor 1 family protein / eRF1 family protein F:translation release factor activity;P:translational termination, translation;C:nucleus;OAMFPV O.I. H.G. S.X.
0.40 50.8 0.87 At1g51900 841617 unknown protein F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;OMBFPVA O.I. H.G. S.X.
0.38 46.7 0.85 At1g47885 841205 leucine-rich repeat family protein F:protein binding;P:signal transduction;C:cellular_component unknown;POB O.I. H.G. S.X.
0.38 46.7 0.84 At2g28170 817363 ATCHX7 member of Putative Na+/H+ antiporter family O.I. H.G. S.X.
0.25 22.6 0.85 At4g31960 829326 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. H.G. S.X.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	O.I.	H.G.	S.X.
0.63	78.1	1.00	At5g39630	833959	vesicle transport v-SNARE family protein	F:SNARE binding, receptor activity;P:membrane fusion, intra-Golgi vesicle-mediated transport;C:membrane;OMFPBAV	O.I.	H.G.	S.X.
0.50	65.3	0.85	At2g14830	815971	unknown protein	F:unknown;P:biological_process unknown;C:cellular_component unknown;MPOFBV	O.I.	H.G.	S.X.
0.50	65.3	0.84	At3g58390	825008	eukaryotic release factor 1 family protein / eRF1 family protein	F:translation release factor activity;P:translational termination, translation;C:nucleus;OAMFPV	O.I.	H.G.	S.X.
0.40	50.8	0.87	At1g51900	841617	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;OMBFPVA	O.I.	H.G.	S.X.
0.38	46.7	0.85	At1g47885	841205	leucine-rich repeat family protein	F:protein binding;P:signal transduction;C:cellular_component unknown;POB	O.I.	H.G.	S.X.
0.38	46.7	0.84	At2g28170	817363	ATCHX7	member of Putative Na+/H+ antiporter family	O.I.	H.G.	S.X.
0.25	22.6	0.85	At4g31960	829326	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	H.G.	S.X.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	O.I.	H.G.	S.X.
0.46	59.8	0.82	At4g21240	827873	F-box family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	H.G.	S.X.
0.44	57.2	0.82	At3g27370		-	-	O.I.	H.G.	S.X.
0.44	57.2	0.77	At3g60430		-	-	O.I.	H.G.	S.X.
0.42	53.9	0.86	At1g65630	842874	DegP3 (DegP protease 3)	Encodes a putative DegP protease.	O.I.	H.G.	S.X.
0.42	53.9	0.76	At2g02640	814793	DC1 domain-containing protein	F:unknown;P:unknown;C:cellular_component unknown;POMF	O.I.	H.G.	S.X.
0.36	43.6	0.76	At4g26040	828710	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	H.G.	S.X.
0.35	41.6	0.86	At5g37910	833770	seven in absentia (SINA) family protein	F:ubiquitin-protein ligase activity, protein binding, zinc ion binding;P:multicellular organismal development, ubiquitin-dependent protein catabolic process, protein ubiquitination;C:nucleus;MPOF	O.I.	H.G.	S.X.
0.33	38.1	0.81	At5g48280	834881	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	H.G.	S.X.
0.33	38.1	0.73	At2g34320	817994	nucleic acid binding	F:nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;PABO	O.I.	H.G.	S.X.
0.32	35.7	0.78	At1g75360	843872	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMB	O.I.	H.G.	S.X.
0.31	33.8	0.82	At5g18870	832005	inosine-uridine preferring nucleoside hydrolase-related	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BOPMFA	O.I.	H.G.	S.X.
0.31	33.8	0.73	At1g04625	3766658	nucleic acid binding	F:nucleic acid binding;P:biological_process unknown;C:cellular_component unknown	O.I.	H.G.	S.X.
0.31	33.8	0.75	At4g01420	826671	CBL5 (CALCINEURIN B-LIKE PROTEIN 5)	Encodes calcineurin B-like protein 5 (CBL5).	O.I.	H.G.	S.X.
0.31	33.8	0.68	At5g24550	832526	BGLU32 (BETA GLUCOSIDASE 32)	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:response to other organism;C:endomembrane system;BOPMFA	O.I.	H.G.	S.X.
0.30	32.1	0.82	At2g39520	818537	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	H.G.	S.X.
0.30	32.1	0.83	At2g05430	815091	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM	O.I.	H.G.	S.X.
0.30	32.1	0.75	At3g17730	821041	anac057 (Arabidopsis NAC domain containing protein 57)	F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:unknown;P	O.I.	H.G.	S.X.
0.29	30.3	0.83	At4g36510	829803	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	H.G.	S.X.
0.29	30.3	0.75	At1g48820	841304	terpene synthase/cyclase family protein	F:lyase activity, magnesium ion binding;P:metabolic process;C:unknown;PO	O.I.	H.G.	S.X.
0.29	30.3	0.75	At2g19630	816482	F-box family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	H.G.	S.X.
0.29	30.3	0.77	At3g51210	824284	flavonol 3-sulfotransferase-related	F:sulfotransferase activity;P:biological_process unknown;C:cellular_component unknown;PM	O.I.	H.G.	S.X.
0.29	30.3	0.74	At5g59060	836023	unknown protein	F:molecular_function unknown;P:unknown;C:unknown;P	O.I.	H.G.	S.X.
0.27	26.2	0.79	At1g71470	843488	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO	O.I.	H.G.	S.X.
0.25	22.6	0.76	At3g53550	824523	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	H.G.	S.X.
0.25	22.6	0.77	At4g13480	826980	AtMYB79 (myb domain protein 79)	Member of the R2R3 factor gene family.	O.I.	H.G.	S.X.
0.25	22.6	0.76	At5g46010	834641	homeobox-leucine zipper transcription factor family protein	F:transcription factor activity;P:regulation of transcription;C:vacuole;P	O.I.	H.G.	S.X.

Link to AtGenExpress Visualization Tool

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
233.5 100.0 GSM311291 Laser capture microdissected (LCM) chalazal endosperm at the linear-cotyledon stage, biological replicate 1 GSE12403 Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
230.9 100.0 GSM133117 RIKEN-YAMAUCHI1A GSE5687 AtGenExpress: Different temperature treatment of seeds
118.2 99.9 GSM184556 Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
98.4 99.9 GSM311292 Laser capture microdissected (LCM) chalazal endosperm at the linear-cotyledon stage, biological replicate 2 GSE12403 Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
78.9 99.9 GSM10456 WT Post-Mature Green Seed 2 GSE680 Transcript Profiling of Arabidopsis Plant Life Cycle
68.0 99.9 GSM10454 WT Post-Mature Green Seed 1 GSE680 Transcript Profiling of Arabidopsis Plant Life Cycle
62.4 99.8 GSM184551 Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
57.1 99.8 GSM133304 RIKEN-NAKABAYASHI1B GSE5700 AtGenExpress: Effect of ABA during seed imbibition
40.5 99.8 GSM133303 RIKEN-NAKABAYASHI1A GSE5700 AtGenExpress: Effect of ABA during seed imbibition
40.2 99.8 GSM143308 Tsu_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
37.8 99.8 GSM143310 Tsu_genomic_hyb_1 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
36.3 99.7 GSM143300 Ts_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
36.0 99.7 GSM143307 Low_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
34.9 99.7 GSM143301 Ts_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
34.6 99.7 GSM253646 Low_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
33.3 99.7 GSM253645 High_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
32.7 99.7 GSM143309 Tsu_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
31.7 99.7 GSM143302 Ts_genomic_hyb_1 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
30.7 99.7 GSM253648 Col-0-1 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
28.9 99.7 GSM253650 Ler 3 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
28.7 99.7 GSM253647 Col-0 3 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
27.3 99.7 GSM143298 Low_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
27.3 99.7 GSM253651 Ler 1 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
26.3 99.7 GSM143299 High_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
26.3 99.7 GSM133118 RIKEN-YAMAUCHI1B GSE5687 AtGenExpress: Different temperature treatment of seeds
24.8 99.6 GSM143306 High_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
24.6 99.6 GSM131698 ATGE_81_B GSE5634 AtGenExpress: Developmental series (siliques and seeds)
23.4 99.6 GSM253649 Col-0-2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
23.0 99.6 GSM133762 Lindsey_1-14_torpedo-root_Rep1_ATH1 GSE5730 Transcriptional profiling of laser-capture micro-dissected embryonic tissues
22.2 99.6 GSM131701 ATGE_82_B GSE5634 AtGenExpress: Developmental series (siliques and seeds)
22.0 99.6 GSM131697 ATGE_81_A GSE5634 AtGenExpress: Developmental series (siliques and seeds)
21.3 99.6 GSM131699 ATGE_81_C GSE5634 AtGenExpress: Developmental series (siliques and seeds)
20.1 99.6 GSM131700 ATGE_82_A GSE5634 AtGenExpress: Developmental series (siliques and seeds)
19.5 99.6 GSM131706 ATGE_84_A GSE5634 AtGenExpress: Developmental series (siliques and seeds)
19.5 99.6 GSM131695 ATGE_79_B GSE5634 AtGenExpress: Developmental series (siliques and seeds)
19.4 99.6 GSM184537 Whole roots 2hr KCl control treated then frozen, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
18.7 99.5 GSM253652 Ler 2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
17.7 99.5 GSM270868 Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep2 GSE10719 Response of Arabidopsis cell culture to phytoprostane A1
16.9 99.5 GSM131702 ATGE_82_C GSE5634 AtGenExpress: Developmental series (siliques and seeds)
15.4 99.5 GSM133766 Lindsey_1-18_torpedo-root_Rep3_ATH1 GSE5730 Transcriptional profiling of laser-capture micro-dissected embryonic tissues
14.4 99.4 GSM270870 Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep3 GSE10719 Response of Arabidopsis cell culture to phytoprostane A1
14.0 99.4 GSM131694 ATGE_79_A GSE5634 AtGenExpress: Developmental series (siliques and seeds)
13.9 99.4 E-ATMX-31-raw-cel-1516947916
13.9 99.4 GSM131708 ATGE_84_D GSE5634 AtGenExpress: Developmental series (siliques and seeds)
13.8 99.4 GSM131707 ATGE_84_B GSE5634 AtGenExpress: Developmental series (siliques and seeds)
13.2 99.4 GSM131696 ATGE_79_C GSE5634 AtGenExpress: Developmental series (siliques and seeds)
13.2 99.4 GSM131705 ATGE_83_C GSE5634 AtGenExpress: Developmental series (siliques and seeds)
12.8 99.3 GSM131703 ATGE_83_A GSE5634 AtGenExpress: Developmental series (siliques and seeds)
12.1 99.3 GSM176879 AWP_Control_1 GSE7334 Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress
10.8 99.2 GSM131704 ATGE_83_B GSE5634 AtGenExpress: Developmental series (siliques and seeds)
10.3 99.2 E-ATMX-31-raw-cel-1516947899
9.8 99.1 GSM133768 Lindsey_1-20_torpedo-basal_Rep5_ATH1 GSE5730 Transcriptional profiling of laser-capture micro-dissected embryonic tissues
9.4 99.1 GSM10451 WT Mature Green Seed 1 GSE680 Transcript Profiling of Arabidopsis Plant Life Cycle
9.0 99.1 E-ATMX-1-raw-cel-1112746209

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title
233.5	100.0	GSM311291	Laser capture microdissected (LCM) chalazal endosperm at the linear-cotyledon stage, biological replicate 1	GSE12403	Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
230.9	100.0	GSM133117	RIKEN-YAMAUCHI1A	GSE5687	AtGenExpress: Different temperature treatment of seeds
118.2	99.9	GSM184556	Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
98.4	99.9	GSM311292	Laser capture microdissected (LCM) chalazal endosperm at the linear-cotyledon stage, biological replicate 2	GSE12403	Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
78.9	99.9	GSM10456	WT Post-Mature Green Seed 2	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
68.0	99.9	GSM10454	WT Post-Mature Green Seed 1	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
62.4	99.8	GSM184551	Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
57.1	99.8	GSM133304	RIKEN-NAKABAYASHI1B	GSE5700	AtGenExpress: Effect of ABA during seed imbibition
40.5	99.8	GSM133303	RIKEN-NAKABAYASHI1A	GSE5700	AtGenExpress: Effect of ABA during seed imbibition
40.2	99.8	GSM143308	Tsu_genomic_hyb_3	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
37.8	99.8	GSM143310	Tsu_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
36.3	99.7	GSM143300	Ts_genomic_hyb_3	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
36.0	99.7	GSM143307	Low_Na_seg_pool_tsu_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
34.9	99.7	GSM143301	Ts_genomic_hyb_2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
34.6	99.7	GSM253646	Low_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
33.3	99.7	GSM253645	High_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
32.7	99.7	GSM143309	Tsu_genomic_hyb_2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
31.7	99.7	GSM143302	Ts_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
30.7	99.7	GSM253648	Col-0-1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
28.9	99.7	GSM253650	Ler 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
28.7	99.7	GSM253647	Col-0 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
27.3	99.7	GSM143298	Low_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
27.3	99.7	GSM253651	Ler 1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
26.3	99.7	GSM143299	High_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
26.3	99.7	GSM133118	RIKEN-YAMAUCHI1B	GSE5687	AtGenExpress: Different temperature treatment of seeds
24.8	99.6	GSM143306	High_Na_seg_pool_tsu_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
24.6	99.6	GSM131698	ATGE_81_B	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
23.4	99.6	GSM253649	Col-0-2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
23.0	99.6	GSM133762	Lindsey_1-14_torpedo-root_Rep1_ATH1	GSE5730	Transcriptional profiling of laser-capture micro-dissected embryonic tissues
22.2	99.6	GSM131701	ATGE_82_B	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
22.0	99.6	GSM131697	ATGE_81_A	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
21.3	99.6	GSM131699	ATGE_81_C	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
20.1	99.6	GSM131700	ATGE_82_A	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
19.5	99.6	GSM131706	ATGE_84_A	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
19.5	99.6	GSM131695	ATGE_79_B	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
19.4	99.6	GSM184537	Whole roots 2hr KCl control treated then frozen, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
18.7	99.5	GSM253652	Ler 2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
17.7	99.5	GSM270868	Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep2	GSE10719	Response of Arabidopsis cell culture to phytoprostane A1
16.9	99.5	GSM131702	ATGE_82_C	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
15.4	99.5	GSM133766	Lindsey_1-18_torpedo-root_Rep3_ATH1	GSE5730	Transcriptional profiling of laser-capture micro-dissected embryonic tissues
14.4	99.4	GSM270870	Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep3	GSE10719	Response of Arabidopsis cell culture to phytoprostane A1
14.0	99.4	GSM131694	ATGE_79_A	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
13.9	99.4	E-ATMX-31-raw-cel-1516947916
13.9	99.4	GSM131708	ATGE_84_D	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
13.8	99.4	GSM131707	ATGE_84_B	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
13.2	99.4	GSM131696	ATGE_79_C	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
13.2	99.4	GSM131705	ATGE_83_C	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
12.8	99.3	GSM131703	ATGE_83_A	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
12.1	99.3	GSM176879	AWP_Control_1	GSE7334	Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress
10.8	99.2	GSM131704	ATGE_83_B	GSE5634	AtGenExpress: Developmental series (siliques and seeds)
10.3	99.2	E-ATMX-31-raw-cel-1516947899
9.8	99.1	GSM133768	Lindsey_1-20_torpedo-basal_Rep5_ATH1	GSE5730	Transcriptional profiling of laser-capture micro-dissected embryonic tissues
9.4	99.1	GSM10451	WT Mature Green Seed 1	GSE680	Transcript Profiling of Arabidopsis Plant Life Cycle
9.0	99.1	E-ATMX-1-raw-cel-1112746209

Biological processes inferred to relate to the module

SF Genes GO ID Process Name Link to AmiGO
0.100 1 GO:0006415 The process resulting in the release of a polypeptide chain from the ribosome, usually in response to a termination codon (UAA, UAG, or UGA in the universal genetic code).
0.083 1 GO:0006891 The directed movement of substances within the Golgi, mediated by small transport vesicles. These either fuse with the cis-Golgi or with each other to form the membrane stacks known as the cis-Golgi reticulum (network).
0.053 1 GO:0006944 The joining of two lipid bilayers to form a single membrane.

SF	Genes	GO ID	Process Name
0.100	1	GO:0006415	The process resulting in the release of a polypeptide chain from the ribosome, usually in response to a termination codon (UAA, UAG, or UGA in the universal genetic code).
0.083	1	GO:0006891	The directed movement of substances within the Golgi, mediated by small transport vesicles. These either fuse with the cis-Golgi or with each other to form the membrane stacks known as the cis-Golgi reticulum (network).
0.053	1	GO:0006944	The joining of two lipid bilayers to form a single membrane.

KEGG PATHWAY inferred to related to the module

SF Genes KEGG ID Pathway name Link to KEGG
0.036 1 04130 SNARE interactions in vesicular transport

SF	Genes	KEGG ID	Pathway name	Link to KEGG
0.036	1	04130	SNARE interactions in vesicular transport

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays

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Gene ID	At5g39630
Gene name	vesicle transport v-SNARE family protein
Module size	7 genes
NF	0.40
%ile	54.9

Co-expression analysis

Gene ID At5g39630 Gene name vesicle transport v-SNARE family protein Module size 7 genes NF 0.40 %ile 54.9

Co-expression network

: Transcription factor, : Binding protein, : Enzyme protein, : Other protein: VF over 0.50, : over 0.25, : below 0.25

Co-expressed genes

Link to AtGenExpress Visualization Tool

Specific experiments for the module

Biological processes inferred to relate to the module

KEGG PATHWAY inferred to related to the module

SFGenesKEGG IDPathway nameLink to KEGG0.036104130SNARE interactions in vesicular transport

Inter-species module comparison

Select a plant to compare co-expressed genes between species.Glycine_maxHordeum_vulgareOryza_sativaPopulus_trichocarpaTriticum_aestivumVitis_viniferaZea_mays

Gene ID At5g39630

Gene name vesicle transport v-SNARE family protein

Module size 7 genes

NF 0.40

%ile 54.9

: Transcription factor, : Binding protein, : Enzyme protein, : Other protein
: VF over 0.50, : over 0.25, : below 0.25

SF Genes KEGG ID Pathway name Link to KEGG
0.036 1 04130 SNARE interactions in vesicular transport

Select a plant to compare co-expressed genes between species.
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays