CoP: Co-expressed Biological Processes

Co-expression analysis

Gene ID At5g16080

Gene name AtCXE17 (Arabidopsis thaliana carboxyesterase 17)

Module size 10 genes

NF 0.41

%ile 57.6

Co-expression network

: Transcription factor, : Binding protein, : Enzyme protein, : Other protein
: VF over 0.50, : over 0.25, : below 0.25

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func. O.I. H.G. S.X. Other DB
0.46 59.8 1.00 At5g16080 831465 AtCXE17 (Arabidopsis thaliana carboxyesterase 17) F:hydrolase activity;P:metabolic process;C:cellular_component unknown;BMOPFAV O.I. H.G. S.X.
0.63 78.1 0.64 At1g19630 838550 CYP722A1 member of CYP722A O.I. H.G. S.X.
0.59 74.7 0.65 At3g28360 822465 PGP16 (P-GLYCOPROTEIN 16) F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:integral to membrane;BOMAFPV O.I. H.G. S.X.
0.46 59.8 0.61 At1g21890 838791 nodulin MtN21 family protein F:unknown;P:unknown;C:membrane;BPOAM O.I. H.G. S.X.
0.40 50.8 0.63 At5g65040 836628 senescence-associated protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. H.G. S.X.
0.36 43.6 0.65 At5g11930 831066 glutaredoxin family protein F:electron carrier activity, protein disulfide oxidoreductase activity;P:cell redox homeostasis;C:unknown;PMBO O.I. H.G. S.X.
0.33 38.1 0.61 At2g44745 819083 WRKY family transcription factor F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleus;PO O.I. H.G. S.X.
0.32 35.7 0.65 At5g63580 836477 FLS2 (FLAVONOL SYNTHASE 2) encodes a protein whose sequence is similar to flavonol synthase O.I. H.G. S.X.
0.29 30.3 0.65 At3g10120 820175 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. H.G. S.X.
0.29 30.3 0.64 At4g25434 828648 ATNUDT10 (Arabidopsis thaliana Nudix hydrolase homolog 10) F:ADP-ribose diphosphatase activity, NAD or NADH binding, catalytic activity;P:metabolic process;C:unknown;BOMPAF O.I. H.G. S.X.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	O.I.	H.G.	S.X.
0.46	59.8	1.00	At5g16080	831465	AtCXE17 (Arabidopsis thaliana carboxyesterase 17)	F:hydrolase activity;P:metabolic process;C:cellular_component unknown;BMOPFAV	O.I.	H.G.	S.X.
0.63	78.1	0.64	At1g19630	838550	CYP722A1	member of CYP722A	O.I.	H.G.	S.X.
0.59	74.7	0.65	At3g28360	822465	PGP16 (P-GLYCOPROTEIN 16)	F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:integral to membrane;BOMAFPV	O.I.	H.G.	S.X.
0.46	59.8	0.61	At1g21890	838791	nodulin MtN21 family protein	F:unknown;P:unknown;C:membrane;BPOAM	O.I.	H.G.	S.X.
0.40	50.8	0.63	At5g65040	836628	senescence-associated protein-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	H.G.	S.X.
0.36	43.6	0.65	At5g11930	831066	glutaredoxin family protein	F:electron carrier activity, protein disulfide oxidoreductase activity;P:cell redox homeostasis;C:unknown;PMBO	O.I.	H.G.	S.X.
0.33	38.1	0.61	At2g44745	819083	WRKY family transcription factor	F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleus;PO	O.I.	H.G.	S.X.
0.32	35.7	0.65	At5g63580	836477	FLS2 (FLAVONOL SYNTHASE 2)	encodes a protein whose sequence is similar to flavonol synthase	O.I.	H.G.	S.X.
0.29	30.3	0.65	At3g10120	820175	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	H.G.	S.X.
0.29	30.3	0.64	At4g25434	828648	ATNUDT10 (Arabidopsis thaliana Nudix hydrolase homolog 10)	F:ADP-ribose diphosphatase activity, NAD or NADH binding, catalytic activity;P:metabolic process;C:unknown;BOMPAF	O.I.	H.G.	S.X.

Click More genes

Link to AtGenExpress Visualization Tool

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
140.8 99.9 GSM205430 met1-3_leaf_fourth-selfed generation_rep02 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
88.3 99.9 GSM205428 met1-3_leaf_fourth-selfed generation_rep01 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
81.1 99.9 GSM205426 met1-3_leaf_second-selfed generation_rep02 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
77.7 99.9 E-MEXP-1344-raw-cel-1559561683
72.4 99.9 GSM253645 High_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
70.1 99.9 GSM205364 met1-3_leaf_second-selfed generation_rep01 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
66.8 99.8 E-MEXP-1344-raw-cel-1559561563
66.0 99.8 GSM253646 Low_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
59.9 99.8 GSM143307 Low_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
58.4 99.8 GSM143308 Tsu_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
57.6 99.8 GSM253649 Col-0-2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
56.7 99.8 GSM143309 Tsu_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
55.3 99.8 GSM143310 Tsu_genomic_hyb_1 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
54.1 99.8 GSM143298 Low_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
53.1 99.8 GSM253648 Col-0-1 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
51.4 99.8 GSM253647 Col-0 3 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
50.9 99.8 GSM143306 High_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
48.7 99.8 GSM205432 Col_ leaf_ wildtype_rep01 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
46.6 99.8 GSM143299 High_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
46.4 99.8 GSM253652 Ler 2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
46.0 99.8 GSM143301 Ts_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
44.8 99.8 GSM253650 Ler 3 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
41.6 99.8 GSM253651 Ler 1 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
40.0 99.8 GSM143300 Ts_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
39.1 99.8 GSM143302 Ts_genomic_hyb_1 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
37.4 99.7 GSM205435 Col_ leaf_ wildtype_rep02 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
34.9 99.7 E-MEXP-1345-raw-cel-1559561199
27.4 99.7 E-MEXP-1345-raw-cel-1559561139
26.9 99.7 GSM184556 Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
24.1 99.6 E-MEXP-1345-raw-cel-1559561169
21.7 99.6 E-MEXP-1344-raw-cel-1559561593
20.3 99.6 E-MEXP-1138-raw-cel-1432772906
18.2 99.5 E-MEXP-1345-raw-cel-1559561289
17.6 99.5 E-MEXP-1138-raw-cel-1432772522
16.3 99.5 E-MEXP-1138-raw-cel-1432772810
16.0 99.5 E-MEXP-1138-raw-cel-1432772714
15.7 99.5 GSM176876 AWP_AL_Txed_1 GSE7334 Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress
15.5 99.5 GSM239251 Columbia glabrous (C24) wild type pollen GSE9408 Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
15.0 99.4 GSM128662 Underwood_1-15_Cor-5x10e7-10h_Rep3_ATH1 GSE5520 Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
14.9 99.4 GSM154505 Arabidopsis hydrated pollen grains rep1 GSE6696 Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis
14.8 99.4 E-MEXP-1344-raw-cel-1559561653
14.2 99.4 E-MEXP-1138-raw-cel-1432772874
13.9 99.4 GSM239253 CaMV::DME pollen GSE9408 Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
13.5 99.4 E-MEXP-1138-raw-cel-1432772554
13.2 99.4 E-MEXP-1138-raw-cel-1432772586
13.1 99.4 E-MEXP-1138-raw-cel-1432772778
13.0 99.4 E-MEXP-1138-raw-cel-1432772746
13.0 99.4 E-MEXP-1345-raw-cel-1559561229
12.5 99.3 E-MEXP-1138-raw-cel-1432772650
12.3 99.3 E-MEXP-1138-raw-cel-1432773130
12.0 99.3 E-MEXP-1138-raw-cel-1432773322
12.0 99.3 GSM142734 DH001_ATH1_A1-UNM1 GSE6162 Transcriptome analysis of Arabidopsis microgametogenesis
11.6 99.3 E-MEXP-1138-raw-cel-1432772938
11.4 99.3 E-MEXP-1138-raw-cel-1432772682
11.3 99.3 E-MEXP-1138-raw-cel-1432772842
11.2 99.2 E-MEXP-1138-raw-cel-1432772618
11.1 99.2 E-MEXP-285-raw-cel-440782791
11.1 99.2 E-MEXP-1344-raw-cel-1559561623
11.0 99.2 GSM131638 ATGE_73_C GSE5632 AtGenExpress: Developmental series (flowers and pollen)
10.9 99.2 E-MEXP-1138-raw-cel-1432773194
10.9 99.2 GSM184551 Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
10.9 99.2 GSM176879 AWP_Control_1 GSE7334 Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress
10.8 99.2 GSM154503 Arabidopsis desiccated mature pollen grains rep1 GSE6696 Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis
10.6 99.2 E-MEXP-1138-raw-cel-1432773354
10.4 99.2 GSM134208 Murray_3-4_D7-GROWTH_Rep1_ATH1 GSE5750 Growth of suspension-cultured cells
10.4 99.2 GSM134204 Murray_3-2_D3-GROWTH_Rep1_ATH1 GSE5750 Growth of suspension-cultured cells
10.4 99.2 GSM131636 ATGE_73_A GSE5632 AtGenExpress: Developmental series (flowers and pollen)
10.4 99.2 E-MEXP-1138-raw-cel-1432773290
10.2 99.2 GSM154504 Arabidopsis desiccated mature pollen grains rep2 GSE6696 Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis
10.2 99.2 E-MEXP-1138-raw-cel-1432773386
10.0 99.2 E-MEXP-1345-raw-cel-1559561259
9.7 99.1 GSM133762 Lindsey_1-14_torpedo-root_Rep1_ATH1 GSE5730 Transcriptional profiling of laser-capture micro-dissected embryonic tissues
9.7 99.1 E-MEXP-1344-raw-cel-1559561713
9.4 99.1 GSM142737 DH001_ATH1_A4-UNM2 GSE6162 Transcriptome analysis of Arabidopsis microgametogenesis
9.3 99.1 E-MEXP-285-raw-cel-440782725
9.2 99.1 E-MEXP-1138-raw-cel-1432773002
9.1 99.1 E-MEXP-1138-raw-cel-1432773066
9.0 99.1 E-MEXP-1138-raw-cel-1432773162
8.8 99.0 GSM131637 ATGE_73_B GSE5632 AtGenExpress: Developmental series (flowers and pollen)
8.7 99.0 E-MEXP-1138-raw-cel-1432773034
8.6 99.0 E-MEXP-1138-raw-cel-1432773098

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title
140.8	99.9	GSM205430	met1-3_leaf_fourth-selfed generation_rep02	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
88.3	99.9	GSM205428	met1-3_leaf_fourth-selfed generation_rep01	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
81.1	99.9	GSM205426	met1-3_leaf_second-selfed generation_rep02	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
77.7	99.9	E-MEXP-1344-raw-cel-1559561683
72.4	99.9	GSM253645	High_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
70.1	99.9	GSM205364	met1-3_leaf_second-selfed generation_rep01	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
66.8	99.8	E-MEXP-1344-raw-cel-1559561563
66.0	99.8	GSM253646	Low_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
59.9	99.8	GSM143307	Low_Na_seg_pool_tsu_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
58.4	99.8	GSM143308	Tsu_genomic_hyb_3	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
57.6	99.8	GSM253649	Col-0-2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
56.7	99.8	GSM143309	Tsu_genomic_hyb_2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
55.3	99.8	GSM143310	Tsu_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
54.1	99.8	GSM143298	Low_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
53.1	99.8	GSM253648	Col-0-1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
51.4	99.8	GSM253647	Col-0 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
50.9	99.8	GSM143306	High_Na_seg_pool_tsu_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
48.7	99.8	GSM205432	Col_ leaf_ wildtype_rep01	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
46.6	99.8	GSM143299	High_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
46.4	99.8	GSM253652	Ler 2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
46.0	99.8	GSM143301	Ts_genomic_hyb_2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
44.8	99.8	GSM253650	Ler 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
41.6	99.8	GSM253651	Ler 1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
40.0	99.8	GSM143300	Ts_genomic_hyb_3	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
39.1	99.8	GSM143302	Ts_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
37.4	99.7	GSM205435	Col_ leaf_ wildtype_rep02	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
34.9	99.7	E-MEXP-1345-raw-cel-1559561199
27.4	99.7	E-MEXP-1345-raw-cel-1559561139
26.9	99.7	GSM184556	Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
24.1	99.6	E-MEXP-1345-raw-cel-1559561169
21.7	99.6	E-MEXP-1344-raw-cel-1559561593
20.3	99.6	E-MEXP-1138-raw-cel-1432772906
18.2	99.5	E-MEXP-1345-raw-cel-1559561289
17.6	99.5	E-MEXP-1138-raw-cel-1432772522
16.3	99.5	E-MEXP-1138-raw-cel-1432772810
16.0	99.5	E-MEXP-1138-raw-cel-1432772714
15.7	99.5	GSM176876	AWP_AL_Txed_1	GSE7334	Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress
15.5	99.5	GSM239251	Columbia glabrous (C24) wild type pollen	GSE9408	Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
15.0	99.4	GSM128662	Underwood_1-15_Cor-5x10e7-10h_Rep3_ATH1	GSE5520	Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
14.9	99.4	GSM154505	Arabidopsis hydrated pollen grains rep1	GSE6696	Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis
14.8	99.4	E-MEXP-1344-raw-cel-1559561653
14.2	99.4	E-MEXP-1138-raw-cel-1432772874
13.9	99.4	GSM239253	CaMV::DME pollen	GSE9408	Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
13.5	99.4	E-MEXP-1138-raw-cel-1432772554
13.2	99.4	E-MEXP-1138-raw-cel-1432772586
13.1	99.4	E-MEXP-1138-raw-cel-1432772778
13.0	99.4	E-MEXP-1138-raw-cel-1432772746
13.0	99.4	E-MEXP-1345-raw-cel-1559561229
12.5	99.3	E-MEXP-1138-raw-cel-1432772650
12.3	99.3	E-MEXP-1138-raw-cel-1432773130
12.0	99.3	E-MEXP-1138-raw-cel-1432773322
12.0	99.3	GSM142734	DH001_ATH1_A1-UNM1	GSE6162	Transcriptome analysis of Arabidopsis microgametogenesis
11.6	99.3	E-MEXP-1138-raw-cel-1432772938
11.4	99.3	E-MEXP-1138-raw-cel-1432772682
11.3	99.3	E-MEXP-1138-raw-cel-1432772842
11.2	99.2	E-MEXP-1138-raw-cel-1432772618
11.1	99.2	E-MEXP-285-raw-cel-440782791
11.1	99.2	E-MEXP-1344-raw-cel-1559561623
11.0	99.2	GSM131638	ATGE_73_C	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
10.9	99.2	E-MEXP-1138-raw-cel-1432773194
10.9	99.2	GSM184551	Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
10.9	99.2	GSM176879	AWP_Control_1	GSE7334	Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress
10.8	99.2	GSM154503	Arabidopsis desiccated mature pollen grains rep1	GSE6696	Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis
10.6	99.2	E-MEXP-1138-raw-cel-1432773354
10.4	99.2	GSM134208	Murray_3-4_D7-GROWTH_Rep1_ATH1	GSE5750	Growth of suspension-cultured cells
10.4	99.2	GSM134204	Murray_3-2_D3-GROWTH_Rep1_ATH1	GSE5750	Growth of suspension-cultured cells
10.4	99.2	GSM131636	ATGE_73_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
10.4	99.2	E-MEXP-1138-raw-cel-1432773290
10.2	99.2	GSM154504	Arabidopsis desiccated mature pollen grains rep2	GSE6696	Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis
10.2	99.2	E-MEXP-1138-raw-cel-1432773386
10.0	99.2	E-MEXP-1345-raw-cel-1559561259
9.7	99.1	GSM133762	Lindsey_1-14_torpedo-root_Rep1_ATH1	GSE5730	Transcriptional profiling of laser-capture micro-dissected embryonic tissues
9.7	99.1	E-MEXP-1344-raw-cel-1559561713
9.4	99.1	GSM142737	DH001_ATH1_A4-UNM2	GSE6162	Transcriptome analysis of Arabidopsis microgametogenesis
9.3	99.1	E-MEXP-285-raw-cel-440782725
9.2	99.1	E-MEXP-1138-raw-cel-1432773002
9.1	99.1	E-MEXP-1138-raw-cel-1432773066
9.0	99.1	E-MEXP-1138-raw-cel-1432773162
8.8	99.0	GSM131637	ATGE_73_B	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
8.7	99.0	E-MEXP-1138-raw-cel-1432773034
8.6	99.0	E-MEXP-1138-raw-cel-1432773098

Biological processes inferred to relate to the module

SF Genes GO ID Process Name Link to AmiGO
0.051 1 GO:0009813 The chemical reactions and pathways resulting in the formation of flavonoids, a group of phenolic derivatives containing a flavan skeleton.
0.018 1 GO:0045454 Any process that maintains the redox environment of a cell or compartment within a cell.

SF	Genes	GO ID	Process Name	Link to AmiGO
0.051	1	GO:0009813	The chemical reactions and pathways resulting in the formation of flavonoids, a group of phenolic derivatives containing a flavan skeleton.
0.018	1	GO:0045454	Any process that maintains the redox environment of a cell or compartment within a cell.

KEGG PATHWAY inferred to related to the module

SF Genes KEGG ID Pathway name Link to KEGG

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays

Back to the CoP portal site

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Gene ID	At5g16080
Gene name	AtCXE17 (Arabidopsis thaliana carboxyesterase 17)
Module size	10 genes
NF	0.41
%ile	57.6

Co-expression analysis

Gene ID At5g16080 Gene name AtCXE17 (Arabidopsis thaliana carboxyesterase 17) Module size 10 genes NF 0.41 %ile 57.6

Co-expression network

: Transcription factor, : Binding protein, : Enzyme protein, : Other protein: VF over 0.50, : over 0.25, : below 0.25

Co-expressed genes

Click More genes

Link to AtGenExpress Visualization Tool

Specific experiments for the module

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO0.0511GO:0009813The chemical reactions and pathways resulting in the formation of flavonoids, a group of phenolic derivatives containing a flavan skeleton.0.0181GO:0045454Any process that maintains the redox environment of a cell or compartment within a cell.

KEGG PATHWAY inferred to related to the module

SFGenesKEGG IDPathway nameLink to KEGG

Inter-species module comparison

Select a plant to compare co-expressed genes between species.Glycine_maxHordeum_vulgareOryza_sativaPopulus_trichocarpaTriticum_aestivumVitis_viniferaZea_mays

Gene ID At5g16080

Gene name AtCXE17 (Arabidopsis thaliana carboxyesterase 17)

Module size 10 genes

NF 0.41

%ile 57.6

: Transcription factor, : Binding protein, : Enzyme protein, : Other protein
: VF over 0.50, : over 0.25, : below 0.25

SF Genes KEGG ID Pathway name Link to KEGG

Select a plant to compare co-expressed genes between species.
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays