CoP: Co-expressed Biological Processes

Co-expression analysis

Gene ID At4g11860

Gene name -

Module size 5 genes

NF 0.37

%ile 50.4

Co-expression network

: Transcription factor, : Binding protein, : Enzyme protein, : Other protein
: VF over 0.50, : over 0.25, : below 0.25

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func. O.I. H.G. S.X. Other DB
0.36 43.6 1.00 At4g11860 826793 - F:molecular_function unknown;P:biological_process unknown;C:cytosol, nucleus, plasma membrane;MFOPB O.I. H.G. S.X.
0.57 73.8 0.93 At1g05090 839327 dentin sialophosphoprotein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BMOFPAV O.I. H.G. S.X.
0.38 46.7 0.92 At2g43210 818922 UBX domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPBV O.I. H.G. S.X.
0.33 38.1 0.93 At1g75850 843918 VPS35B (VPS35 HOMOLOG B) F:unknown;P:intracellular protein transport, retrograde transport, endosome to Golgi;C:cellular_component unknown;MFOPB O.I. H.G. S.X.
0.32 35.7 0.93 At1g32130 840105 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPBVA O.I. H.G. S.X.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	O.I.	H.G.	S.X.
0.36	43.6	1.00	At4g11860	826793	-	F:molecular_function unknown;P:biological_process unknown;C:cytosol, nucleus, plasma membrane;MFOPB	O.I.	H.G.	S.X.
0.57	73.8	0.93	At1g05090	839327	dentin sialophosphoprotein-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BMOFPAV	O.I.	H.G.	S.X.
0.38	46.7	0.92	At2g43210	818922	UBX domain-containing protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPBV	O.I.	H.G.	S.X.
0.33	38.1	0.93	At1g75850	843918	VPS35B (VPS35 HOMOLOG B)	F:unknown;P:intracellular protein transport, retrograde transport, endosome to Golgi;C:cellular_component unknown;MFOPB	O.I.	H.G.	S.X.
0.32	35.7	0.93	At1g32130	840105	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPBVA	O.I.	H.G.	S.X.

Click More genes

Link to AtGenExpress Visualization Tool

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
112.6 99.9 GSM13779 Dexamethasone plus cycloheximide GSE911 Identification of LEAFY targets during reproductive transition
100.9 99.9 GSM13780 Cycloheximide GSE911 Identification of LEAFY targets during reproductive transition
83.9 99.9 GSM13783 Dexamethasone plus cycloheximide - replicate GSE911 Identification of LEAFY targets during reproductive transition
72.1 99.9 GSM13784 Cycloheximide - replicate GSE911 Identification of LEAFY targets during reproductive transition
58.3 99.8 E-MEXP-265-raw-cel-414618394
50.7 99.8 E-MEXP-265-raw-cel-414617695
45.9 99.8 E-MEXP-265-raw-cel-414618491
43.3 99.8 E-MEXP-265-raw-cel-414617890
40.9 99.8 E-MEXP-265-raw-cel-414618796
40.6 99.8 E-MEXP-265-raw-cel-414618291
39.1 99.8 E-MEXP-265-raw-cel-414618693
37.5 99.7 GSM184551 Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
37.2 99.7 GSM143298 Low_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
36.1 99.7 GSM253651 Ler 1 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
35.2 99.7 GSM133753 Turner_A-7-Turne-WT-Base1_SLD GSE5729 Role of COV in vascular patterning
34.6 99.7 GSM143300 Ts_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
34.3 99.7 E-MEXP-265-raw-cel-414617783
32.8 99.7 GSM253650 Ler 3 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
32.6 99.7 E-MEXP-265-raw-cel-414618585
31.3 99.7 E-MEXP-807-raw-cel-1173272948
30.1 99.7 GSM253648 Col-0-1 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
29.3 99.7 GSM143302 Ts_genomic_hyb_1 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
28.8 99.7 GSM143299 High_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
28.4 99.7 GSM131655 ATGE_27_A GSE5633 AtGenExpress: Developmental series (shoots and stems)
27.9 99.7 GSM143307 Low_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
27.8 99.7 GSM143301 Ts_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
27.3 99.7 GSM143309 Tsu_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
26.4 99.7 GSM253652 Ler 2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
25.3 99.6 GSM133754 Turner_A-8-Turne-WT-Base2_SLD GSE5729 Role of COV in vascular patterning
25.0 99.6 GSM253645 High_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
24.8 99.6 GSM133736 Buchanan-Wollaston_A-8-bwoll-Ei2_SLD GSE5727 The effects of mutants in stress response pathways on gene expression during senescence
24.7 99.6 GSM205435 Col_ leaf_ wildtype_rep02 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
24.3 99.6 GSM133738 Buchanan-Wollaston_A-10-bwoll-Co2_SLD GSE5727 The effects of mutants in stress response pathways on gene expression during senescence
23.5 99.6 GSM133787 Brueggemann_A-5-Brueg-Mck_SLD GSE5731 UV-B Responses in Light Grown Plants: Similarities to Biotic Stress
23.0 99.6 GSM143308 Tsu_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
21.7 99.6 GSM143306 High_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
21.4 99.6 E-MEXP-807-raw-cel-1173273088
19.5 99.6 GSM133786 Brueggemann_A-4-Brueg-PpH_SLD GSE5731 UV-B Responses in Light Grown Plants: Similarities to Biotic Stress
19.3 99.6 E-MEXP-807-raw-cel-1173273116
19.1 99.6 GSM253649 Col-0-2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
17.8 99.5 E-ATMX-32-raw-cel-1562974409
17.1 99.5 GSM268245 dor-drought-1, biological rep 1 GSE10643 Transcription profiling of Arabidopsis dor mutant and wild-type plants in response to drought stress.
16.9 99.5 GSM268249 dor-drought-2, biological rep 2 GSE10643 Transcription profiling of Arabidopsis dor mutant and wild-type plants in response to drought stress.
16.7 99.5 GSM143310 Tsu_genomic_hyb_1 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
16.7 99.5 E-ATMX-32-raw-cel-1562974681
16.7 99.5 GSM131656 ATGE_27_B GSE5633 AtGenExpress: Developmental series (shoots and stems)
16.5 99.5 GSM284387 Arabidopsis GSUS4b GSE11262 Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
16.3 99.5 GSM131657 ATGE_27_C GSE5633 AtGenExpress: Developmental series (shoots and stems)
16.1 99.5 GSM253646 Low_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
15.3 99.4 GSM133735 Buchanan-Wollaston_A-7-bwoll-Ei1_SLD GSE5727 The effects of mutants in stress response pathways on gene expression during senescence
15.0 99.4 E-ATMX-32-raw-cel-1562974621
14.2 99.4 GSM253647 Col-0 3 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
13.9 99.4 GSM133737 Buchanan-Wollaston_A-9-bwoll-Co1_SLD GSE5727 The effects of mutants in stress response pathways on gene expression during senescence
13.8 99.4 E-MEXP-807-raw-cel-1173273196
13.5 99.4 GSM133731 Buchanan-Wollaston_A-3-bwoll-C0S_SLD GSE5727 The effects of mutants in stress response pathways on gene expression during senescence
13.1 99.4 GSM134396 St.Clair_1-93_349_Tsu-1_0.02%-silwet_Rep3_ATH1 GSE5755 Expression Level Polymorphism Project (ELP) - Tsu-1
12.5 99.3 GSM131540 ATGE_26_A GSE5630 AtGenExpress: Developmental series (leaves)
12.2 99.3 GSM131542 ATGE_26_C GSE5630 AtGenExpress: Developmental series (leaves)
11.7 99.3 GSM131538 ATGE_25_B GSE5630 AtGenExpress: Developmental series (leaves)
11.7 99.3 GSM133734 Buchanan-Wollaston_A-6-bwoll-NG2_SLD GSE5727 The effects of mutants in stress response pathways on gene expression during senescence
11.6 99.3 E-ATMX-32-raw-cel-1562974595
11.6 99.3 GSM134414 St.Clair_1-111_430_Van-0_0.02%-silwet_Rep3_ATH1 GSE5756 Expression Level Polymorphism Project (ELP) - Van-0
11.6 99.3 GSM131537 ATGE_25_A GSE5630 AtGenExpress: Developmental series (leaves)
11.5 99.3 GSM131325 AtGen_6-3521_Saltstress-Roots-12.0h_Rep1 GSE5623 AtGenExpress: Stress Treatments (Salt stress)
11.4 99.3 GSM131539 ATGE_25_C GSE5630 AtGenExpress: Developmental series (leaves)
11.1 99.2 E-MEXP-1451-raw-cel-1585200362
10.9 99.2 GSM133733 Buchanan-Wollaston_A-5-bwoll-NG1_SLD GSE5727 The effects of mutants in stress response pathways on gene expression during senescence
10.8 99.2 E-MEXP-807-raw-cel-1173273144
10.3 99.2 E-MEXP-1454-raw-cel-1585857925
10.3 99.2 GSM133732 Buchanan-Wollaston_A-4-bwoll-C5S_SLD GSE5727 The effects of mutants in stress response pathways on gene expression during senescence
10.3 99.2 E-ATMX-32-raw-cel-1562974443
10.3 99.2 E-MEXP-509-raw-cel-829148348
10.1 99.2 GSM311289 Laser capture microdissected (LCM) cellularized endosperm at the linear-cotyledon stage, biological replicate 1 GSE12403 Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
10.0 99.2 E-MEXP-509-raw-cel-829148313
9.7 99.1 E-ATMX-32-raw-cel-1562974527
9.6 99.1 E-MEXP-807-raw-cel-1173273252
9.5 99.1 E-MEXP-98-raw-cel-320189024
9.3 99.1 GSM268251 WT-drought-2, biological rep 2 GSE10643 Transcription profiling of Arabidopsis dor mutant and wild-type plants in response to drought stress.
9.1 99.1 GSM131329 AtGen_6-3621_Saltstress-Roots-24.0h_Rep1 GSE5623 AtGenExpress: Stress Treatments (Salt stress)
8.6 99.0 GSM260879 A2-Greco-WT GSE10322 Higher order transcriptional regulation conferred by the bountiful gain of function mutant
8.6 99.0 E-MEXP-509-raw-cel-829148492

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title
112.6	99.9	GSM13779	Dexamethasone plus cycloheximide	GSE911	Identification of LEAFY targets during reproductive transition
100.9	99.9	GSM13780	Cycloheximide	GSE911	Identification of LEAFY targets during reproductive transition
83.9	99.9	GSM13783	Dexamethasone plus cycloheximide - replicate	GSE911	Identification of LEAFY targets during reproductive transition
72.1	99.9	GSM13784	Cycloheximide - replicate	GSE911	Identification of LEAFY targets during reproductive transition
58.3	99.8	E-MEXP-265-raw-cel-414618394
50.7	99.8	E-MEXP-265-raw-cel-414617695
45.9	99.8	E-MEXP-265-raw-cel-414618491
43.3	99.8	E-MEXP-265-raw-cel-414617890
40.9	99.8	E-MEXP-265-raw-cel-414618796
40.6	99.8	E-MEXP-265-raw-cel-414618291
39.1	99.8	E-MEXP-265-raw-cel-414618693
37.5	99.7	GSM184551	Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
37.2	99.7	GSM143298	Low_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
36.1	99.7	GSM253651	Ler 1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
35.2	99.7	GSM133753	Turner_A-7-Turne-WT-Base1_SLD	GSE5729	Role of COV in vascular patterning
34.6	99.7	GSM143300	Ts_genomic_hyb_3	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
34.3	99.7	E-MEXP-265-raw-cel-414617783
32.8	99.7	GSM253650	Ler 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
32.6	99.7	E-MEXP-265-raw-cel-414618585
31.3	99.7	E-MEXP-807-raw-cel-1173272948
30.1	99.7	GSM253648	Col-0-1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
29.3	99.7	GSM143302	Ts_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
28.8	99.7	GSM143299	High_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
28.4	99.7	GSM131655	ATGE_27_A	GSE5633	AtGenExpress: Developmental series (shoots and stems)
27.9	99.7	GSM143307	Low_Na_seg_pool_tsu_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
27.8	99.7	GSM143301	Ts_genomic_hyb_2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
27.3	99.7	GSM143309	Tsu_genomic_hyb_2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
26.4	99.7	GSM253652	Ler 2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
25.3	99.6	GSM133754	Turner_A-8-Turne-WT-Base2_SLD	GSE5729	Role of COV in vascular patterning
25.0	99.6	GSM253645	High_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
24.8	99.6	GSM133736	Buchanan-Wollaston_A-8-bwoll-Ei2_SLD	GSE5727	The effects of mutants in stress response pathways on gene expression during senescence
24.7	99.6	GSM205435	Col_ leaf_ wildtype_rep02	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
24.3	99.6	GSM133738	Buchanan-Wollaston_A-10-bwoll-Co2_SLD	GSE5727	The effects of mutants in stress response pathways on gene expression during senescence
23.5	99.6	GSM133787	Brueggemann_A-5-Brueg-Mck_SLD	GSE5731	UV-B Responses in Light Grown Plants: Similarities to Biotic Stress
23.0	99.6	GSM143308	Tsu_genomic_hyb_3	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
21.7	99.6	GSM143306	High_Na_seg_pool_tsu_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
21.4	99.6	E-MEXP-807-raw-cel-1173273088
19.5	99.6	GSM133786	Brueggemann_A-4-Brueg-PpH_SLD	GSE5731	UV-B Responses in Light Grown Plants: Similarities to Biotic Stress
19.3	99.6	E-MEXP-807-raw-cel-1173273116
19.1	99.6	GSM253649	Col-0-2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
17.8	99.5	E-ATMX-32-raw-cel-1562974409
17.1	99.5	GSM268245	dor-drought-1, biological rep 1	GSE10643	Transcription profiling of Arabidopsis dor mutant and wild-type plants in response to drought stress.
16.9	99.5	GSM268249	dor-drought-2, biological rep 2	GSE10643	Transcription profiling of Arabidopsis dor mutant and wild-type plants in response to drought stress.
16.7	99.5	GSM143310	Tsu_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
16.7	99.5	E-ATMX-32-raw-cel-1562974681
16.7	99.5	GSM131656	ATGE_27_B	GSE5633	AtGenExpress: Developmental series (shoots and stems)
16.5	99.5	GSM284387	Arabidopsis GSUS4b	GSE11262	Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
16.3	99.5	GSM131657	ATGE_27_C	GSE5633	AtGenExpress: Developmental series (shoots and stems)
16.1	99.5	GSM253646	Low_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
15.3	99.4	GSM133735	Buchanan-Wollaston_A-7-bwoll-Ei1_SLD	GSE5727	The effects of mutants in stress response pathways on gene expression during senescence
15.0	99.4	E-ATMX-32-raw-cel-1562974621
14.2	99.4	GSM253647	Col-0 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
13.9	99.4	GSM133737	Buchanan-Wollaston_A-9-bwoll-Co1_SLD	GSE5727	The effects of mutants in stress response pathways on gene expression during senescence
13.8	99.4	E-MEXP-807-raw-cel-1173273196
13.5	99.4	GSM133731	Buchanan-Wollaston_A-3-bwoll-C0S_SLD	GSE5727	The effects of mutants in stress response pathways on gene expression during senescence
13.1	99.4	GSM134396	St.Clair_1-93_349_Tsu-1_0.02%-silwet_Rep3_ATH1	GSE5755	Expression Level Polymorphism Project (ELP) - Tsu-1
12.5	99.3	GSM131540	ATGE_26_A	GSE5630	AtGenExpress: Developmental series (leaves)
12.2	99.3	GSM131542	ATGE_26_C	GSE5630	AtGenExpress: Developmental series (leaves)
11.7	99.3	GSM131538	ATGE_25_B	GSE5630	AtGenExpress: Developmental series (leaves)
11.7	99.3	GSM133734	Buchanan-Wollaston_A-6-bwoll-NG2_SLD	GSE5727	The effects of mutants in stress response pathways on gene expression during senescence
11.6	99.3	E-ATMX-32-raw-cel-1562974595
11.6	99.3	GSM134414	St.Clair_1-111_430_Van-0_0.02%-silwet_Rep3_ATH1	GSE5756	Expression Level Polymorphism Project (ELP) - Van-0
11.6	99.3	GSM131537	ATGE_25_A	GSE5630	AtGenExpress: Developmental series (leaves)
11.5	99.3	GSM131325	AtGen_6-3521_Saltstress-Roots-12.0h_Rep1	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
11.4	99.3	GSM131539	ATGE_25_C	GSE5630	AtGenExpress: Developmental series (leaves)
11.1	99.2	E-MEXP-1451-raw-cel-1585200362
10.9	99.2	GSM133733	Buchanan-Wollaston_A-5-bwoll-NG1_SLD	GSE5727	The effects of mutants in stress response pathways on gene expression during senescence
10.8	99.2	E-MEXP-807-raw-cel-1173273144
10.3	99.2	E-MEXP-1454-raw-cel-1585857925
10.3	99.2	GSM133732	Buchanan-Wollaston_A-4-bwoll-C5S_SLD	GSE5727	The effects of mutants in stress response pathways on gene expression during senescence
10.3	99.2	E-ATMX-32-raw-cel-1562974443
10.3	99.2	E-MEXP-509-raw-cel-829148348
10.1	99.2	GSM311289	Laser capture microdissected (LCM) cellularized endosperm at the linear-cotyledon stage, biological replicate 1	GSE12403	Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
10.0	99.2	E-MEXP-509-raw-cel-829148313
9.7	99.1	E-ATMX-32-raw-cel-1562974527
9.6	99.1	E-MEXP-807-raw-cel-1173273252
9.5	99.1	E-MEXP-98-raw-cel-320189024
9.3	99.1	GSM268251	WT-drought-2, biological rep 2	GSE10643	Transcription profiling of Arabidopsis dor mutant and wild-type plants in response to drought stress.
9.1	99.1	GSM131329	AtGen_6-3621_Saltstress-Roots-24.0h_Rep1	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
8.6	99.0	GSM260879	A2-Greco-WT	GSE10322	Higher order transcriptional regulation conferred by the bountiful gain of function mutant
8.6	99.0	E-MEXP-509-raw-cel-829148492

Biological processes inferred to relate to the module

SF Genes GO ID Process Name Link to AmiGO
0.167 1 GO:0042147 The directed movement of membrane-bounded vesicles from endosomes back to the trans-Golgi network where they are recycled for further rounds of transport.
0.012 1 GO:0006886 The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.

SF	Genes	GO ID	Process Name	Link to AmiGO
0.167	1	GO:0042147	The directed movement of membrane-bounded vesicles from endosomes back to the trans-Golgi network where they are recycled for further rounds of transport.
0.012	1	GO:0006886	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.

KEGG PATHWAY inferred to related to the module

SF Genes KEGG ID Pathway name Link to KEGG

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays

Back to the CoP portal site

Back to the KAGIANA project homepage

Gene ID	At4g11860
Gene name	-
Module size	5 genes
NF	0.37
%ile	50.4

Co-expression analysis

Gene ID At4g11860 Gene name - Module size 5 genes NF 0.37 %ile 50.4

Co-expression network

: Transcription factor, : Binding protein, : Enzyme protein, : Other protein: VF over 0.50, : over 0.25, : below 0.25

Co-expressed genes

Click More genes

Link to AtGenExpress Visualization Tool

Specific experiments for the module

Biological processes inferred to relate to the module

KEGG PATHWAY inferred to related to the module

SFGenesKEGG IDPathway nameLink to KEGG

Inter-species module comparison

Select a plant to compare co-expressed genes between species.Glycine_maxHordeum_vulgareOryza_sativaPopulus_trichocarpaTriticum_aestivumVitis_viniferaZea_mays

Gene ID At4g11860

Gene name -

Module size 5 genes

NF 0.37

%ile 50.4

: Transcription factor, : Binding protein, : Enzyme protein, : Other protein
: VF over 0.50, : over 0.25, : below 0.25

SF Genes KEGG ID Pathway name Link to KEGG

Select a plant to compare co-expressed genes between species.
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays