| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | O.I. | H.G. | S.X. | Other DB |
| 0.33 | 38.1 | 1.00 | At3g53480 | 824516 | PDR9 (PLEIOTROPIC DRUG RESISTANCE 9) | F:ATPase activity, coupled to transmembrane movement of substances;P:multidrug transport;C:plasma membrane;BOMAFPV | O.I. | H.G. | S.X. | |
| 0.75 | 86.9 | 0.81 | At1g68150 | 843143 | WRKY9 | member of WRKY Transcription Factor; Group II-b | O.I. | H.G. | S.X. | |
| 0.67 | 81.6 | 0.76 | At3g20960 | 821646 | CYP705A33 | member of CYP705A | O.I. | H.G. | S.X. | |
| 0.60 | 75.7 | 0.81 | At1g69810 | 843317 | WRKY36 | member of WRKY Transcription Factor; Group II-b | O.I. | H.G. | S.X. | |
| 0.60 | 75.7 | 0.78 | At2g14100 | 815896 | CYP705A13 | a member of the cytochrome P450 family | O.I. | H.G. | S.X. | |
| 0.50 | 65.3 | 0.74 | At1g50520 | 841474 | CYP705A27 | member of CYP705A | O.I. | H.G. | S.X. | |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
| 273.1 | 100.0 | GSM205364 | met1-3_leaf_second-selfed generation_rep01 | GSE8279 | Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation |  |
| 179.9 | 100.0 | GSM205428 | met1-3_leaf_fourth-selfed generation_rep01 | GSE8279 | Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation | |
| 81.9 | 99.9 | GSM205426 | met1-3_leaf_second-selfed generation_rep02 | GSE8279 | Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation | |
| 76.1 | 99.9 | GSM205435 | Col_ leaf_ wildtype_rep02 | GSE8279 | Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation | |
| 72.4 | 99.9 | GSM184556 | Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2 | GSE7631 | Cell-specific nitrogen responses in the Arabidopsis root | |
| 69.6 | 99.9 | GSM143298 | Low_Na_seg_pool_ts_col_F2 | GSE6203 | Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 | |
| 69.2 | 99.9 | GSM253649 | Col-0-2 | GSE10039 | Low_Mo_Arabidopsis_mapping_MOT1 | |
| 65.5 | 99.8 | GSM253648 | Col-0-1 | GSE10039 | Low_Mo_Arabidopsis_mapping_MOT1 | |
| 61.4 | 99.8 | GSM205432 | Col_ leaf_ wildtype_rep01 | GSE8279 | Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation | |
| 55.3 | 99.8 | GSM253646 | Low_Mo_seg_pool_Ler_col_F2 | GSE10039 | Low_Mo_Arabidopsis_mapping_MOT1 | |
| 53.6 | 99.8 | GSM253652 | Ler 2 | GSE10039 | Low_Mo_Arabidopsis_mapping_MOT1 | |
| 51.9 | 99.8 | GSM143310 | Tsu_genomic_hyb_1 | GSE6203 | Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 | |
| 50.1 | 99.8 | GSM253645 | High_Mo_seg_pool_Ler_col_F2 | GSE10039 | Low_Mo_Arabidopsis_mapping_MOT1 | |
| 49.7 | 99.8 | GSM253650 | Ler 3 | GSE10039 | Low_Mo_Arabidopsis_mapping_MOT1 | |
| 45.9 | 99.8 | GSM143307 | Low_Na_seg_pool_tsu_col_F2 | GSE6203 | Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 | |
| 44.5 | 99.8 | GSM253651 | Ler 1 | GSE10039 | Low_Mo_Arabidopsis_mapping_MOT1 | |
| 43.6 | 99.8 | GSM253647 | Col-0 3 | GSE10039 | Low_Mo_Arabidopsis_mapping_MOT1 | |
| 41.8 | 99.8 | GSM143306 | High_Na_seg_pool_tsu_col_F2 | GSE6203 | Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 | |
| 41.1 | 99.8 | GSM143309 | Tsu_genomic_hyb_2 | GSE6203 | Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 | |
| 39.6 | 99.8 | GSM143301 | Ts_genomic_hyb_2 | GSE6203 | Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 | |
| 39.1 | 99.8 | GSM205430 | met1-3_leaf_fourth-selfed generation_rep02 | GSE8279 | Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation | |
| 38.9 | 99.8 | GSM143302 | Ts_genomic_hyb_1 | GSE6203 | Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 | |
| 38.3 | 99.8 | GSM290756 | root - 01% oxygen - 30min - D | GSE11558 | transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants | |
| 36.0 | 99.7 | GSM290755 | root - 01% oxygen - 2h - F | GSE11558 | transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants | |
| 34.2 | 99.7 | GSM143308 | Tsu_genomic_hyb_3 | GSE6203 | Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 | |
| 33.8 | 99.7 | GSM143300 | Ts_genomic_hyb_3 | GSE6203 | Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 | |
| 32.9 | 99.7 | GSM131237 | AtGen_6-0221_Control-Roots-1.0h_Rep1 | GSE5620 | AtGenExpress: Stress Treatments (Control plants) | |
| 26.2 | 99.7 | GSM290753 | root - 01% oxygen - 2h - E | GSE11558 | transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants | |
| 24.8 | 99.6 | GSM143299 | High_Na_seg_pool_ts_col_F2 | GSE6203 | Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 | |
| 23.2 | 99.6 | GSM290762 | root - 04% oxygen - 30min - D | GSE11558 | transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants | |
| 22.1 | 99.6 | GSM184537 | Whole roots 2hr KCl control treated then frozen, biological rep1 | GSE7631 | Cell-specific nitrogen responses in the Arabidopsis root | |
| 21.3 | 99.6 | GSM226530 | LCOLUMELLASB | GSE8934 | A high resolution organ expression map reveals novel expression patterns and predicts cellular function | |
| 20.7 | 99.6 | GSM290760 | root - 04% oxygen - 2h - D | GSE11558 | transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants | |
| 15.9 | 99.5 | GSM206277 | Wild type, water treatment, biological rep1 | GSE8319 | A LysM Receptor-like Kinase Mediates Chitin Perception and Fungal Resistance in Arabidopsis | |
| 15.4 | 99.5 | GSM206278 | Wild type, water treatment, biological rep2 | GSE8319 | A LysM Receptor-like Kinase Mediates Chitin Perception and Fungal Resistance in Arabidopsis | |
| 13.7 | 99.4 | GSM245477 | 2 hr Hypoxia Stress Total RNA Rep 2 | GSE9719 | Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenation | |
| 12.1 | 99.3 | GSM311284 | Laser capture microdissected (LCM) general seed coat at the pre-globular stage, biological replicate 2 | GSE12402 | Expression data from Arabidopsis seed compartments at the pre-globular stage | |
| 12.0 | 99.3 | GSM245482 | 2 hr Hypoxia Stress IP RNA Rep 2 | GSE9719 | Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenation | |
| 10.7 | 99.2 | GSM131294 | AtGen_6-2322_Osmoticstress-Roots-3.0h_Rep2 | GSE5622 | AtGenExpress: Stress Treatments (Osmotic stress) | |
| 9.6 | 99.1 | GSM311291 | Laser capture microdissected (LCM) chalazal endosperm at the linear-cotyledon stage, biological replicate 1 | GSE12403 | Expression data from Arabidopsis seed compartments at the linear-cotyledon stage | |
| 9.6 | 99.1 | GSM206279 | Wild type, water treatment, biological rep3 | GSE8319 | A LysM Receptor-like Kinase Mediates Chitin Perception and Fungal Resistance in Arabidopsis | |
| 9.2 | 99.1 | GSM206285 | Chitin receptor mutant, water treatment, biological rep3 | GSE8319 | A LysM Receptor-like Kinase Mediates Chitin Perception and Fungal Resistance in Arabidopsis | |
: Transcription factor, 
: Binding protein, 
: Enzyme protein, 
: Other protein
: VF over 0.50, 
: over 0.25, 
