VF %ile CC Gene ID Repr. ID Gene name Func. O.I. H.G. S.X. Other DB 0.52 67.4 1.00 At3g44460 823571 DPBF2 basic leucine zipper transcription factor (BZIP67), identical to basic leucine zipper transcription factor GI:18656053 from (Arabidopsis thaliana); identical to cDNA basic leucine zipper transcription factor (atbzip67 gene) GI:18656052. Located in the nucleus and expressed during seed maturation in the cotyledons. O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) 0.95 97.0 0.77 At1g25410 839127 ATIPT6 AB061404 Arabidopsis thaliana AtIPT6 mRNA for cytokinin synthase, complete cds O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) 0.86 93.1 0.77 At5g51490 835223 pectinesterase family protein F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFOM O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) 0.80 89.8 0.81 At1g18100 838390 E12A11 E12A11 protein (E12A11) O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) 0.76 87.4 0.77 At1g73290 843663 scpl5 (serine carboxypeptidase-like 5) F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFBO O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) 0.70 83.5 0.78 At2g25940 817135 ALPHA-VPE (alpha-vacuolar processing enzyme) Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteinases that is expressed in vegetative organs and is upregulated in association with various types of cell death and under stressed conditions. O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) 0.70 83.5 0.84 At1g65880 842900 BZO1 (BENZOYLOXYGLUCOSINOLATE 1) Encodes a benzoate-CoA ligase. Involved in the biosynthesis of benzoyloxyglucosinolate in Arabidopsis seeds. O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) 0.67 81.6 0.84 At4g25980 828704 cationic peroxidase, putative F:peroxidase activity;P:response to oxidative stress;C:endomembrane system;PFOM O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) 0.67 81.6 0.73 At5g44360 834462 FAD-binding domain-containing protein F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;BFPOAM O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) 0.59 74.7 0.89 At5g07500 830642 PEI1 Encodes an embryo-specific zinc finger transcription factor required for heart-stage embryo formation. O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report)
Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO 71.2 99.9 GSM205426 met1-3_leaf_second-selfed generation_rep02 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation 61.9 99.8 GSM184893 Arabidopsis, root cells, columella root cap, standard conditions, replicate 2 GSE7641 Expression analysis of root cell-types after treatment with salt 61.2 99.8 GSM205428 met1-3_leaf_fourth-selfed generation_rep01 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation 60.5 99.8 GSM143306 High_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 60.3 99.8 GSM184910 Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 1 GSE7641 Expression analysis of root cell-types after treatment with salt 58.8 99.8 GSM143310 Tsu_genomic_hyb_1 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 58.4 99.8 GSM266668 Arabidopsis, root cells, columella root cap, -Fe, replicate 3 GSE10501 Expression analysis of root cell-types after iron deficiency (-Fe) treatment 57.7 99.8 GSM205364 met1-3_leaf_second-selfed generation_rep01 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation 56.9 99.8 GSM143309 Tsu_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 54.4 99.8 GSM184892 Arabidopsis, root cells, columella root cap, standard conditions, replicate 1 GSE7641 Expression analysis of root cell-types after treatment with salt 52.7 99.8 GSM143308 Tsu_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 52.3 99.8 GSM205430 met1-3_leaf_fourth-selfed generation_rep02 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation 51.7 99.8 GSM253648 Col-0-1 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1 48.7 99.8 GSM266666 Arabidopsis, root cells, columella root cap, -Fe, replicate 1 GSE10501 Expression analysis of root cell-types after iron deficiency (-Fe) treatment 46.3 99.8 GSM253647 Col-0 3 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1 45.5 99.8 GSM143298 Low_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 45.2 99.8 E-MEXP-807-raw-cel-1173273170 44.9 99.8 GSM253649 Col-0-2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1 44.9 99.8 E-MEXP-807-raw-cel-1173273116 42.7 99.8 GSM143307 Low_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 42.4 99.8 GSM147966 lec1-1 Globular Stage Seed 2 GSE1051 Seed development in LEAFY COTYLEDON1 mutants 42.4 99.8 GSM184912 Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 3 GSE7641 Expression analysis of root cell-types after treatment with salt 41.4 99.8 GSM147964 WT Globular Stage Seed 2 GSE680 Transcript Profiling of Arabidopsis Plant Life Cycle 41.3 99.8 GSM253646 Low_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1 40.6 99.8 GSM147965 lec1-1 Globular Stage Seed 1 GSE1051 Seed development in LEAFY COTYLEDON1 mutants 39.5 99.8 GSM143302 Ts_genomic_hyb_1 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 38.5 99.8 GSM253645 High_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1 37.9 99.8 GSM184911 Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 2 GSE7641 Expression analysis of root cell-types after treatment with salt 37.6 99.7 GSM143299 High_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 37.1 99.7 GSM143301 Ts_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 35.6 99.7 GSM143300 Ts_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 34.7 99.7 GSM10479 lec1-1 Cotyledon Stage Seed 1 GSE1051 Seed development in LEAFY COTYLEDON1 mutants 34.0 99.7 GSM266667 Arabidopsis, root cells, columella root cap, -Fe, replicate 2 GSE10501 Expression analysis of root cell-types after iron deficiency (-Fe) treatment 33.6 99.7 GSM253651 Ler 1 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1 33.3 99.7 GSM10480 lec1-1 Cotyledon Stage Seed 2 GSE1051 Seed development in LEAFY COTYLEDON1 mutants 32.7 99.7 GSM133820 Yang_1-5_young-pod_Rep3_ATH1 GSE5736 To identify changes in gene expression during silique senescence in Arabidopsis thaliana 31.2 99.7 E-MEXP-807-raw-cel-1173273060 30.8 99.7 GSM253652 Ler 2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1 30.8 99.7 GSM10448 WT Cotyledon Stage Seed 1 GSE680 Transcript Profiling of Arabidopsis Plant Life Cycle 30.3 99.7 E-MEXP-807-raw-cel-1173273223 30.2 99.7 GSM184894 Arabidopsis, root cells, columella root cap, standard conditions, replicate 3 GSE7641 Expression analysis of root cell-types after treatment with salt 29.7 99.7 E-MEXP-807-raw-cel-1173273088 29.3 99.7 GSM253650 Ler 3 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1 29.2 99.7 GSM10449 WT Cotyledon Stage Seed 2 GSE680 Transcript Profiling of Arabidopsis Plant Life Cycle 27.4 99.7 E-MEXP-807-raw-cel-1173273196 25.8 99.7 GSM147963 WT Globular Stage Seed 1 GSE680 Transcript Profiling of Arabidopsis Plant Life Cycle 22.4 99.6 GSM205435 Col_ leaf_ wildtype_rep02 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation 14.1 99.4 GSM131688 ATGE_77_D GSE5634 AtGenExpress: Developmental series (siliques and seeds) 13.9 99.4 E-MEXP-285-raw-cel-440783213 13.8 99.4 GSM131685 ATGE_76_A GSE5634 AtGenExpress: Developmental series (siliques and seeds) 13.7 99.4 E-MEXP-285-raw-cel-440783152 13.6 99.4 GSM131689 ATGE_77_E GSE5634 AtGenExpress: Developmental series (siliques and seeds) 13.6 99.4 GSM131687 ATGE_76_C GSE5634 AtGenExpress: Developmental series (siliques and seeds) 13.0 99.4 GSM131690 ATGE_77_F GSE5634 AtGenExpress: Developmental series (siliques and seeds) 12.9 99.3 GSM131686 ATGE_76_B GSE5634 AtGenExpress: Developmental series (siliques and seeds) 12.0 99.3 E-MEXP-1451-raw-cel-1585200298 12.0 99.3 GSM131322 AtGen_6-3422_Saltstress-Roots-6.0h_Rep2 GSE5623 AtGenExpress: Stress Treatments (Salt stress) 11.6 99.3 E-MEXP-1451-raw-cel-1585200202 11.5 99.3 GSM131321 AtGen_6-3421_Saltstress-Roots-6.0h_Rep1 GSE5623 AtGenExpress: Stress Treatments (Salt stress) 11.4 99.3 E-MEXP-1451-raw-cel-1585200170 11.2 99.2 E-MEXP-1451-raw-cel-1585200234 11.1 99.2 E-MEXP-1451-raw-cel-1585200330 10.6 99.2 GSM311284 Laser capture microdissected (LCM) general seed coat at the pre-globular stage, biological replicate 2 GSE12402 Expression data from Arabidopsis seed compartments at the pre-globular stage 9.3 99.1 GSM205432 Col_ leaf_ wildtype_rep01 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation 8.9 99.0 GSM133816 Yang_1-1_young-pod_Rep1_ATH1 GSE5736 To identify changes in gene expression during silique senescence in Arabidopsis thaliana
: Transcription factor, 
: Binding protein, 
: Enzyme protein, 
: Other protein
: VF over 0.50, 
: over 0.25, 
