VF %ile CC Gene ID Repr. ID Gene name Func. O.I. H.G. S.X. Other DB 0.33 38.1 1.00 At3g05280 819692 integral membrane Yip1 family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFP O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) 0.77 88.0 0.95 At1g14670 838029 endomembrane protein 70, putative F:unknown;P:transport;C:integral to membrane, Golgi apparatus, membrane;MPOF O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) 0.67 81.6 0.94 At5g36290 833627 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system, membrane;BMOPFA O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) 0.61 76.7 0.94 At4g12650 826878 - F:unknown;P:unknown;C:integral to membrane, Golgi apparatus, plasma membrane, vacuole;MPOF O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) 0.60 75.7 0.94 At5g35160 833470 - F:unknown;P:unknown;C:integral to membrane, Golgi apparatus;MPOF O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) 0.48 62.5 0.95 At5g18520 831970 - F:unknown;P:unknown;C:endomembrane system, integral to membrane;MPOFB O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) 0.34 39.8 0.95 At3g56110 824777 PRA1.B1 (PRENYLATED RAB ACCEPTOR 1.B1) F:molecular_function unknown;P:vesicle-mediated transport;C:endoplasmic reticulum;PMFO O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) 0.31 33.8 0.94 At1g61790 842476 OST3/OST6 family protein F:oligosaccharide transmembrane transporter activity;P:biological_process unknown;C:endoplasmic reticulum, plasma membrane, chloroplast;MFPO O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report)
Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO 123.2 99.9 GSM184556 Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root 94.0 99.9 GSM205426 met1-3_leaf_second-selfed generation_rep02 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation 93.5 99.9 GSM143300 Ts_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 81.7 99.9 GSM143302 Ts_genomic_hyb_1 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 80.6 99.9 GSM143301 Ts_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 78.9 99.9 GSM143310 Tsu_genomic_hyb_1 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 68.7 99.9 GSM143299 High_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 68.5 99.9 GSM205432 Col_ leaf_ wildtype_rep01 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation 67.5 99.8 GSM143309 Tsu_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 62.1 99.8 GSM143298 Low_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 58.3 99.8 GSM143308 Tsu_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 57.6 99.8 GSM143307 Low_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 57.0 99.8 GSM253649 Col-0-2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1 56.5 99.8 GSM184537 Whole roots 2hr KCl control treated then frozen, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root 54.6 99.8 GSM253648 Col-0-1 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1 54.0 99.8 GSM253647 Col-0 3 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1 51.4 99.8 GSM253646 Low_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1 47.0 99.8 GSM143306 High_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 45.8 99.8 E-MEXP-849-raw-cel-1181980990 41.5 99.8 E-MEXP-849-raw-cel-1181980982 36.3 99.7 GSM253645 High_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1 35.6 99.7 GSM133762 Lindsey_1-14_torpedo-root_Rep1_ATH1 GSE5730 Transcriptional profiling of laser-capture micro-dissected embryonic tissues 32.0 99.7 GSM131706 ATGE_84_A GSE5634 AtGenExpress: Developmental series (siliques and seeds) 29.7 99.7 GSM131707 ATGE_84_B GSE5634 AtGenExpress: Developmental series (siliques and seeds) 29.5 99.7 GSM253650 Ler 3 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1 29.5 99.7 GSM205430 met1-3_leaf_fourth-selfed generation_rep02 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation 29.1 99.7 GSM258004 LMPC-derived phloem_3 GSE10247 Transcriptome analysis of the Arabidopsis phloem 28.8 99.7 E-MEXP-849-raw-cel-1181980998 27.5 99.7 GSM131703 ATGE_83_A GSE5634 AtGenExpress: Developmental series (siliques and seeds) 27.4 99.7 GSM131705 ATGE_83_C GSE5634 AtGenExpress: Developmental series (siliques and seeds) 27.0 99.7 GSM284387 Arabidopsis GSUS4b GSE11262 Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage. 25.7 99.7 GSM253652 Ler 2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1 24.8 99.6 GSM131704 ATGE_83_B GSE5634 AtGenExpress: Developmental series (siliques and seeds) 24.1 99.6 GSM131708 ATGE_84_D GSE5634 AtGenExpress: Developmental series (siliques and seeds) 23.9 99.6 GSM133120 RIKEN-YAMAUCHI2B GSE5687 AtGenExpress: Different temperature treatment of seeds 23.6 99.6 GSM205364 met1-3_leaf_second-selfed generation_rep01 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation 23.3 99.6 GSM133303 RIKEN-NAKABAYASHI1A GSE5700 AtGenExpress: Effect of ABA during seed imbibition 22.5 99.6 GSM133312 RIKEN-LI1B GSE5701 AtGenExpress: Basic hormone treatment of seeds 22.1 99.6 GSM133314 RIKEN-LI2B GSE5701 AtGenExpress: Basic hormone treatment of seeds 21.9 99.6 GSM133117 RIKEN-YAMAUCHI1A GSE5687 AtGenExpress: Different temperature treatment of seeds 21.4 99.6 GSM133774 Lindsey_1-26_torpedo-meristem_Rep2_ATH1 GSE5730 Transcriptional profiling of laser-capture micro-dissected embryonic tissues 19.3 99.6 GSM133119 RIKEN-YAMAUCHI2A GSE5687 AtGenExpress: Different temperature treatment of seeds 19.3 99.6 GSM133318 RIKEN-LI4B GSE5701 AtGenExpress: Basic hormone treatment of seeds 19.0 99.5 GSM205428 met1-3_leaf_fourth-selfed generation_rep01 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation 17.1 99.5 GSM133118 RIKEN-YAMAUCHI1B GSE5687 AtGenExpress: Different temperature treatment of seeds 17.0 99.5 GSM184497 Endodermis&Pericycle root cells 2hr transitory KNO3 treated, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root 15.9 99.5 GSM205435 Col_ leaf_ wildtype_rep02 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation 15.8 99.5 GSM253651 Ler 1 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1 14.8 99.4 GSM131603 ATGE_41_A GSE5632 AtGenExpress: Developmental series (flowers and pollen) 14.3 99.4 GSM284386 Arabidopsis GSUS3 GSE11262 Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage. 13.9 99.4 GSM131701 ATGE_82_B GSE5634 AtGenExpress: Developmental series (siliques and seeds) 13.7 99.4 GSM258002 LMPC-derived phloem_1 GSE10247 Transcriptome analysis of the Arabidopsis phloem 13.5 99.4 GSM131604 ATGE_41_B GSE5632 AtGenExpress: Developmental series (flowers and pollen) 12.9 99.3 GSM134315 Penfield_1-17_embryo-PAC_Rep2_ATH1 GSE5751 The early post-germinative embryo and endosperm transcriptomes in Arabidopsis 12.3 99.3 GSM134314 Penfield_1-16_embryo-PAC_Rep1_ATH1 GSE5751 The early post-germinative embryo and endosperm transcriptomes in Arabidopsis 12.1 99.3 GSM134316 Penfield_1-18_embryo-PAC_Rep3_ATH1 GSE5751 The early post-germinative embryo and endosperm transcriptomes in Arabidopsis 11.9 99.3 GSM133313 RIKEN-LI2A GSE5701 AtGenExpress: Basic hormone treatment of seeds 11.8 99.3 GSM133311 RIKEN-LI1A GSE5701 AtGenExpress: Basic hormone treatment of seeds 11.2 99.2 GSM184552 Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root 10.9 99.2 GSM133320 RIKEN-LI5B GSE5701 AtGenExpress: Basic hormone treatment of seeds 10.6 99.2 GSM131605 ATGE_41_C GSE5632 AtGenExpress: Developmental series (flowers and pollen) 10.4 99.2 GSM258003 LMPC-derived phloem_2 GSE10247 Transcriptome analysis of the Arabidopsis phloem 10.3 99.2 GSM134312 Penfield_1-14_embryo-ABA_Rep2_ATH1 GSE5751 The early post-germinative embryo and endosperm transcriptomes in Arabidopsis 10.3 99.2 GSM184906 Arabidopsis, root cells, protophloem, standard conditions, replicate 3 GSE7641 Expression analysis of root cell-types after treatment with salt 10.2 99.2 GSM131702 ATGE_82_C GSE5634 AtGenExpress: Developmental series (siliques and seeds) 10.1 99.2 GSM133316 RIKEN-LI3B GSE5701 AtGenExpress: Basic hormone treatment of seeds 9.5 99.1 GSM131700 ATGE_82_A GSE5634 AtGenExpress: Developmental series (siliques and seeds) 9.1 99.1 GSM184551 Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root 9.0 99.1 GSM133317 RIKEN-LI4A GSE5701 AtGenExpress: Basic hormone treatment of seeds 9.0 99.1 GSM134311 Penfield_1-13_embryo-ABA_Rep1_ATH1 GSE5751 The early post-germinative embryo and endosperm transcriptomes in Arabidopsis